* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fclust’ ...
** this is package ‘fclust’ version ‘2.1.2’
** package ‘fclust’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-8) 14.3.0’
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuOTRdq/R.INSTALL15a94447cf41e6/fclust/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c F.cpp -o F.o
F.cpp: In function ‘arma::cube F_gkb(arma::mat, arma::mat, arma::mat, arma::mat, double, double, unsigned int, unsigned int, int, double, arma::vec)’:
F.cpp:51:31: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
51 | kappaFin = arma::is_finite(kappa);
| ~~~~~~~~~~~~~~~^~~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:518,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from func.h:4,
from F.cpp:2:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
F.cpp: In function ‘arma::cube F_gkb_ent(arma::mat, arma::mat, arma::mat, arma::mat, double, unsigned int, unsigned int, int, double, arma::vec)’:
F.cpp:112:31: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
112 | kappaFin = arma::is_finite(kappa);
| ~~~~~~~~~~~~~~~^~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c FKM_rcpp.cpp -o FKM_rcpp.o
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:87:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
87 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:518,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from func.h:4,
from FKM_rcpp.cpp:2:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:261:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
261 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:431:36: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
431 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp:476:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
476 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:488:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
488 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:587:38: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
587 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:710:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
710 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:896:31: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
896 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:919:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
919 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_ent_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1018:29: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1018 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1137:36: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
1137 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp:1193:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1193 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:1206:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1206 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_pf_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1289:34: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
1289 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1450:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1450 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent(arma::mat, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1644:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1644 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_noise(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:1880:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1880 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:1892:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
1892 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_noise_U(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2004:38: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
2004 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent_noise(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2153:31: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2153 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:2175:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2175 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gkb_ent_noise_U(arma::mat, double, double, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2286:29: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2286 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2442:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2442 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:2454:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2454 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent(arma::mat, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2695:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2695 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:2708:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2708 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_noise(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:2974:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2974 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:2987:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
2987 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_noise_U(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3107:40: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3107 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent_noise(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3272:33: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3272 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:3299:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3299 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_gk_ent_noise_U(arma::mat, double, double, arma::vec, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3417:31: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3417 | if(arma::is_finite(U(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med(arma::mat, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3541:38: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3541 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp:3583:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3583 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:3595:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3595 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_U(arma::mat, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3678:36: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3678 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_noise(arma::mat, double, double, unsigned int, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:3857:36: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
3857 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp:3910:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3910 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:3922:21: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
3922 | if(arma::is_finite(func_opt)){
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainFKM_med_noise_U(arma::mat, double, double, unsigned int, unsigned int, unsigned int, arma::mat, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4045:34: warning: ‘bool arma::is_finite(const Base<typename T1::elem_type, T1>&) [with T1 = subview<double>; typename T1::elem_type = double]’ is deprecated: change arma::is_finite(X) to X.is_finite() [-Wdeprecated-declarations]
4045 | nan_check = arma::is_finite(U.row(i));
| ~~~~~~~~~~~~~~~^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:181:1: note: declared here
181 | is_finite(const Base<typename T1::elem_type,T1>& X)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainnefrc(arma::mat, double, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4242:26: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4242 | if(!arma::is_finite(func))
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:4253:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4253 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainnefrc_U(arma::mat, arma::mat, double, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4381:26: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4381 | if(!arma::is_finite(func))
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainrnefrc(arma::mat, double, double, unsigned int, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4542:26: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4542 | if(!arma::is_finite(func))
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp:4555:23: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4555 | if(arma::is_finite(func) == true)
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
FKM_rcpp.cpp: In function ‘Rcpp::List mainrnefrc_U(arma::mat, arma::mat, double, double, unsigned int, unsigned int, double, unsigned int, std::string, double)’:
FKM_rcpp.cpp:4698:24: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
4698 | if(!arma::is_finite(func))
| ~~~~~~~~~~~~~~~^~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c centroids.cpp -o centroids.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distance.cpp -o distance.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c func.cpp -o func.o
func.cpp: In function ‘void distCheck(Rcpp::NumericMatrix, int, int)’:
func.cpp:124:32: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
124 | finite = (arma::is_finite(D(i,j)) && arma::is_finite(D(j,i)));
| ~~~~~~~~~~~~~~~^~~~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:518,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from func.cpp:2:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
func.cpp:124:59: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
124 | finite = (arma::is_finite(D(i,j)) && arma::is_finite(D(j,i)));
| ~~~~~~~~~~~~~~~^~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c memDeg.cpp -o memDeg.o
memDeg.cpp: In function ‘arma::mat memb_degree_ent(arma::mat, double, unsigned int, unsigned int, unsigned int)’:
memDeg.cpp:139:27: warning: ‘bool arma::is_finite(eT, const typename arma_scalar_only<eT>::result*) [with eT = double; typename arma_scalar_only<eT>::result = double]’ is deprecated: change arma::is_finite(val) to std::isfinite(val) [-Wdeprecated-declarations]
139 | if(arma::is_finite(out(i,j)) == false)
| ~~~~~~~~~~~~~~~^~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:518,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from func.h:4,
from memDeg.cpp:2:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_misc.hpp:167:1: note: declared here
167 | is_finite(const eT x, const typename arma_scalar_only<eT>::result* junk = nullptr)
| ^~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c partition_comp.cpp -o partition_comp.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o fclust.so F.o FKM_rcpp.o RcppExports.o centroids.o distance.o func.o init.o memDeg.o partition_comp.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuOTRdq/R.INSTALL15a94447cf41e6/fclust/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuOTRdq/R.INSTALL15a94447cf41e6/fclust/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuOTRdq/R.INSTALL15a94447cf41e6/fclust/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-fclust/00new/fclust/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘fclust’
finding HTML links ... done
ARI.F html
FKM html
FKM.ent html
FKM.ent.noise html
FKM.gk html
FKM.gk.ent html
FKM.gk.ent.noise html
FKM.gk.noise html
FKM.gkb html
FKM.gkb.ent html
FKM.gkb.ent.noise html
FKM.gkb.noise html
FKM.med html
FKM.med.noise html
FKM.noise html
FKM.pf html
FKM.pf.noise html
Fclust html
Fclust.compare html
Fclust.index html
Hraw html
JACCARD.F html
MPC html
Mc html
NBA html
NEFRC html
NEFRC.noise html
PC html
PE html
RI.F html
SIL.F html
SIL html
VAT html
VCV html
VCV2 html
VIFCR html
XB html
butterfly html
cl.memb.H html
cl.memb html
cl.memb.t html
cl.size.H html
cl.size html
houseVotes html
plot.fclust html
print.fclust html
summary.fclust html
synt.data html
synt.data2 html
unemployment html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fclust)