* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fMRItools’ ...
** package ‘fMRItools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘fMRItools’
    finding HTML links ... done
    CompCor                                 html  
    CompCor.noise_comps                     html  
    CompCor_HCP                             html  
    Mode                                    html  
    PCA                                     html  
    all_binary                              html  
    all_integers                            html  
    as.matrix_ifti                          html  
    bandstop_filter                         html  
    carpetplot                              html  
    carpetplot_stack                        html  
    check_req_ifti_pkg                      html  
    colCenter                               html  
    coordlist_to_vol                        html  
    crop_vol                                html  
    data_CompCor_Params                     html  
    dct_bases                               html  
    dct_convert                             html  
    despike_3D                              html  
    despike_3D.interpolate                  html  
    despike_3D.qreg                         html  
    detrend                                 html  
    dim_reduce                              html  
    dual_reg                                html  
    erode_mask_vol                          html  
    fMRItools                               html  
    fft_detrend                             html  
    format_data                             html  
    format_path                             html  
    fsl_bptf                                html  
    get_FORMAT                              html  
    get_NIFTI_ROI_masks                     html  
    get_kwargs                              html  
    hat_matrix                              html  
    infer_format_ifti                       html  
    infer_format_ifti_vec                   html  
    is.fname                                html  
    is_1                                    html  
    is_constant                             html  
    is_integer                              html  
    is_posNum                               html  
    make_mask                               html  
    match_exactly                           html  
    match_input                             html  
    mean_squares                            html  
    merge_kwargs                            html  
    noise_Params                            html  
    norm_BOLD                               html  
    nuisance_regression                     html  
    pad_vol                                 html  
    pct_sig                                 html  
    read_nifti                              html  
    rowMedians2                             html  
    scale_design_mat                        html  
    scale_med                               html  
    scale_timeseries                        html  
    sign_flip                               html  
    skew_pos                                html  
    sum_neighbors_vol                       html  
    sys_path                                html  
    unmask_mat                              html  
    unvec_mat                               html  
    unvec_vol                               html  
    validate_design_mat                     html  
    var_decomp                              html  
    vox_locations                           html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fMRItools)