* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘escalation’ ...
** package ‘escalation’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘escalation’
    finding HTML links ... done
    CorrelatedPatientSample                 html  
    PatientSample                           html  
    as_tibble.derived_dose_selector         html  
    as_tibble.dose_paths                    html  
    as_tibble.simulations_collection        html  
    calculate_probabilities                 html  
    cohort                                  html  
    cohorts_of_n                            html  
    continue                                html  
    convergence_plot                        html  
    crystallised_dose_paths                 html  
    demand_n_at_dose                        html  
    dont_skip_doses                         html  
    dose_admissible                         html  
    dose_indices                            html  
    dose_paths                              html  
    dose_paths_function                     html  
    doses_given                             html  
    eff                                     html  
    eff_at_dose                             html  
    eff_limit                               html  
    empiric_eff_rate                        html  
    empiric_tox_rate                        html  
    enforce_three_plus_three                html  
    escalation-package                      html  
    fit                                     html  
    follow_path                             html  
    get_boin                                html  
    get_boin12                              html  
    get_dfcrm                               html  
    get_dose_paths                          html  
    get_empiric_crm_skeleton_weights        html  
    get_mtpi                                html  
    get_mtpi2                               html  
    get_potential_outcomes                  html  
    get_random_selector                     html  
    get_three_plus_three                    html  
    get_tpi                                 html  
    get_trialr_crm                          html  
    get_trialr_efftox                       html  
    finding level-2 HTML links ... done

    get_trialr_nbg                          html  
    get_wages_and_tait                      html  
    graph_paths                             html  
    is_randomising                          html  
    mean_prob_eff                           html  
    mean_prob_tox                           html  
    median_prob_eff                         html  
    median_prob_tox                         html  
    model_frame                             html  
    n_at_dose                               html  
    n_at_recommended_dose                   html  
    num_cohort_outcomes                     html  
    num_dose_path_nodes                     html  
    num_doses                               html  
    num_eff                                 html  
    num_patients                            html  
    num_tox                                 html  
    parse_phase1_2_outcomes                 html  
    parse_phase1_outcomes                   html  
    phase1_2_outcomes_to_cohorts            html  
    phase1_outcomes_to_cohorts              html  
    prob_administer                         html  
    prob_eff_quantile                       html  
    prob_recommend                          html  
    prob_tox_exceeds                        html  
    prob_tox_quantile                       html  
    prob_tox_samples                        html  
    recommended_dose                        html  
    select_boin12_obd                       html  
    select_boin_mtd                         html  
    select_dose_by_cibp                     html  
    select_mtpi2_mtd                        html  
    select_mtpi_mtd                         html  
    select_tpi_mtd                          html  
    selector                                html  
    selector_factory                        html  
    simulate_compare                        html  
    simulate_trials                         html  
    simulation_function                     html  
    simulations                             html  
    simulations_collection                  html  
    spread_paths                            html  
    stack_sims_vert                         html  
    stop_at_n                               html  
    stop_when_n_at_dose                     html  
    stop_when_too_toxic                     html  
    stop_when_tox_ci_covered                html  
    supports_sampling                       html  
    three_plus_three                        html  
    tox                                     html  
    tox_at_dose                             html  
    tox_limit                               html  
    tox_target                              html  
    trial_duration                          html  
    try_rescue_dose                         html  
    utility                                 html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (escalation)