* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ern’ ...
** this is package ‘ern’ version ‘2.1.2’
** package ‘ern’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ern’
    finding HTML links ... done
    agg_to_daily                            html  
    attach_startdate_agg                    html  
    attach_t                                html  
    attach_t_agg                            html  
    check_cl.input_format                   html  
    check_df.input_daily                    html  
    check_dist                              html  
    check_for_deconv                        html  
    check_prm.R                             html  
    check_prm.daily                         html  
    check_prm.daily.check                   html  
    check_prm.smooth                        html  
    cl.data                                 html  
    correct_underreporting                  html  
    deconv                                  html  
    deconv_ww_inc                           html  
    deconvolution_RL                        html  
    def_dist                                html  
    draw_from_gamma                         html  
    estimate_R_cl                           html  
    estimate_R_cl_rep                       html  
    estimate_R_cl_single                    html  
    estimate_R_ww                           html  
    extract_mcmc_values                     html  
    fit_jags_aggreg                         html  
    get_discrete_dist                       html  
    get_realizations                        html  
    get_use_dates                           html  
    inc2R_one_iter                          html  
    incidence_to_R                          html  
    linear_int_daily                        html  
    na_to_0                                 html  
    plot_diagnostic_cl                      html  
    plot_diagnostic_ww                      html  
    plot_dist                               html  
    plot_gelman_rubin                       html  
    plot_traces                             html  
    reports_to_incidence                    html  
    reshape_fit_jags                        html  
    sample_a_dist                           html  
    sample_from_dist                        html  
    sample_post_ee                          html  
    smooth_cl                               html  
    smooth_ww                               html  
    summarise_by_date_iters                 html  
    summarise_report_counts                 html  
    summary_postsamples                     html  
    ww.data                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ern)