* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘epinetr’ ...
** this is package ‘epinetr’ version ‘0.96’
** package ‘epinetr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUtXJfa/R.INSTALL13d543516a8c7e/epinetr/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c recMask.cpp -o recMask.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rng.cpp -o rng.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c serMat.cpp -o serMat.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o epinetr.so RcppExports.o recMask.o rng.o serMat.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUtXJfa/R.INSTALL13d543516a8c7e/epinetr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUtXJfa/R.INSTALL13d543516a8c7e/epinetr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUtXJfa/R.INSTALL13d543516a8c7e/epinetr/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-epinetr/00new/epinetr/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘epinetr’
    finding HTML links ... done
    Population                              html  
    addEffects                              html  
    attachEpiNet                            html  
    epinetr                                 html  
    geno100snp                              html  
    getAddCoefs                             html  
    getAddOffset                            html  
    getAlleleFreqRun                        html  
    getComponents                           html  
    getEpiNet                               html  
    getEpiOffset                            html  
    getEpistasis                            html  
    getGeno                                 html  
    getHaplo                                html  
    getIncMatrix                            html  
    getInteraction                          html  
    getPedigree                             html  
    getPhased                               html  
    getQTL                                  html  
    getSubPop                               html  
    loadGeno                                html  
    map100snp                               html  
    plot.EpiNet                             html  
    plot.Population                         html  
    print.Population                        html  
    rincmat100snp                           html  
    runSim                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (epinetr)