* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘eigencore’ ... ** this is package ‘eigencore’ version ‘1.0.3’ ** package ‘eigencore’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5Kq0vt/R.INSTALL2af4eb6f22a0c6/eigencore/src' g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c arnoldi.cpp -o arnoldi.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c block_golub_kahan_basis.cpp -o block_golub_kahan_basis.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c block_lanczos.cpp -o block_lanczos.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c certificates.cpp -o certificates.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gram_svd.cpp -o gram_svd.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lobpcg.cpp -o lobpcg.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c native_operators.cpp -o native_operators.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c orthogonalization.cpp -o orthogonalization.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c projection.cpp -o projection.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c retained_svd.cpp -o retained_svd.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c scalar_krylov.cpp -o scalar_krylov.o g++-16 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c small_dense.cpp -o small_dense.o g++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o eigencore.so arnoldi.o block_golub_kahan_basis.o block_lanczos.o certificates.o gram_svd.o init.o lobpcg.o native_operators.o orthogonalization.o projection.o retained_svd.o scalar_krylov.o small_dense.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5Kq0vt/R.INSTALL2af4eb6f22a0c6/eigencore/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5Kq0vt/R.INSTALL2af4eb6f22a0c6/eigencore/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5Kq0vt/R.INSTALL2af4eb6f22a0c6/eigencore/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-eigencore/00new/eigencore/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘eigencore’ finding HTML links ... done adjoint html alpha_beta html as_operator html auto html b_orthogonalize html backward_error html benchmark_eigen_methods html benchmark_svd_methods html both_ends html center html certificate html check_adjoint html cholqr2 html compose html crossprod_operator html diagnostics html eig_full html eig_partial html eigen_problem html eigencore-package html eigs html eigs_sym html euclidean html general html generalized_schur html generalized_svd html golub_kahan html hermitian html lanczos html largest html largest_imaginary html largest_magnitude html largest_real html left_vectors html linear_operator html lobpcg html mgs2 html nearest html operator_scale html operator_sum html orthogonality_loss html plan_solver html randomized html rayleigh_ritz html residuals html right_vectors html scale_cols html scale_rows html shift_invert html shifted_cholesky_preconditioner html shifted_diagonal_preconditioner html shifted_tridiagonal_preconditioner html smallest html smallest_imaginary html smallest_magnitude html smallest_real html solve.eigencore_eigen_problem html solve.eigencore_svd_problem html svd_partial html svd_problem html svds html symmetric_operator html validate_eigen_accuracy html validate_svd_accuracy html values html vectors html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (eigencore)