* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘eiPack’ ...
** this is package ‘eiPack’ version ‘0.2-2’
** package ‘eiPack’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp36ZRCP/R.INSTALL10ff1f2440c2b1/eiPack/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c eiutil.c -o eiutil.o
eiutil.c: In function ‘write_beta’:
eiutil.c:127:7: warning: variable ‘ret’ set but not used [-Wunused-but-set-variable]
127 | int ret=0;
| ^~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rbycei.c -o rbycei.o
rbycei.c: In function ‘rbycei_fcn1’:
rbycei.c:195:8: warning: ‘b_draws’ may be used uninitialized [-Wmaybe-uninitialized]
195 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq];
| ^~~~~~~~~~~~~
rbycei.c:41:31: note: ‘b_draws’ was declared here
41 | SEXP a_acc, b_acc, a_draws, b_draws, ccount_draws, output_list;
| ^~~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rbycei2.c -o rbycei2.o
rbycei2.c: In function ‘rbycei_fcn2’:
rbycei2.c:254:8: warning: ‘b_draws’ may be used uninitialized [-Wmaybe-uninitialized]
254 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq];
| ^~~~~~~~~~~~~
rbycei2.c:48:31: note: ‘b_draws’ was declared here
48 | SEXP a_acc, b_acc, a_draws, b_draws, ccount_draws, usr_draws, output_list;
| ^~~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rbyceicov2.c -o rbyceicov2.o
rbyceicov2.c: In function ‘rbycei_fcn3’:
rbyceicov2.c:388:8: warning: ‘b_draws’ may be used uninitialized [-Wmaybe-uninitialized]
388 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq];
| ^~~~~~~~~~~~~
rbyceicov2.c:55:18: note: ‘b_draws’ was declared here
55 | SEXP dr_draws, b_draws, g_draws, d_draws, ccount_draws, output_list;
| ^~~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rbyceicov4.c -o rbyceicov4.o
rbyceicov4.c: In function ‘rbycei_fcn4’:
rbyceicov4.c:407:8: warning: ‘b_draws’ may be used uninitialized [-Wmaybe-uninitialized]
407 | REAL(b_draws)[counter + qq*samp] = REAL(betaarray)[qq];
| ^~~~~~~~~~~~~
rbyceicov4.c:57:18: note: ‘b_draws’ was declared here
57 | SEXP dr_draws, b_draws, g_draws, d_draws, ccount_draws, usr_draws, output_list;
| ^~~~~~~
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o eiPack.so eiutil.o init.o rbycei.o rbycei2.o rbyceicov2.o rbyceicov4.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp36ZRCP/R.INSTALL10ff1f2440c2b1/eiPack/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp36ZRCP/R.INSTALL10ff1f2440c2b1/eiPack/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp36ZRCP/R.INSTALL10ff1f2440c2b1/eiPack/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-eiPack/00new/eiPack/libs
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘eiPack’
finding HTML links ... done
bounds html
cover.plot html
density.plot html
ei.MD.bayes html
ei.reg html
ei.reg.bayes html
lambda.MD html
lambda.reg html
lambda.reg.bayes html
mergeMD html
plot.bounds html
read.betas html
redistrict html
senc html
tuneA html
tuneB html
tuneMD html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (eiPack)