* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘eha’ ...
** package ‘eha’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-5) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-5) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp7FFyx2/R.INSTALL1839a63db5aad3/eha/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c aftexpreg.c -o aftexpreg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c aftreg.c -o aftreg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c aftregGomp.c -o aftregGomp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c c2f.c -o c2f.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c chek.f -o chek.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c cleanup.f -o cleanup.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c coxfun.c -o coxfun.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c coxfun2.c -o coxfun2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c eha_fun.c -o eha_fun.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c eha_zeroin.c -o eha_zeroin.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c expnr.f -o expnr.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c expreg.c -o expreg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c frail_ml.c -o frail_ml.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c geomsup.f -o geomsup.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c getHaz.f -o getHaz.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c getsums.f -o getsums.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c getsums.null.f -o getsums.null.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c ghq.f -o ghq.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c gmlfun.f -o gmlfun.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c hazards.f -o hazards.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c loglik_ph.c -o loglik_ph.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c loglik_phexp.c -o loglik_phexp.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c martres.f -o martres.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c phexpreg.c -o phexpreg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c phfun.c -o phfun.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c phreg.c -o phreg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c risk.c -o risk.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sizes.c -o sizes.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c split.f -o split.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sup.c -o sup.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c weibnr.f -o weibnr.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c weibreg.c -o weibreg.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c wfunc.f -o wfunc.o
gfortran-13  -fpic  -g -O2 -Wall -mtune=native  -c wfunc.null.f -o wfunc.null.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o eha.so aftexpreg.o aftreg.o aftregGomp.o c2f.o chek.o cleanup.o coxfun.o coxfun2.o eha_fun.o eha_zeroin.o expnr.o expreg.o frail_ml.o geomsup.o getHaz.o getsums.o getsums.null.o ghq.o gmlfun.o hazards.o init.o loglik_ph.o loglik_phexp.o martres.o phexpreg.o phfun.o phreg.o risk.o sizes.o split.o sup.o weibnr.o weibreg.o wfunc.o wfunc.null.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp7FFyx2/R.INSTALL1839a63db5aad3/eha/src'
make[1]: Entering directory '/tmp/Rtmp7FFyx2/R.INSTALL1839a63db5aad3/eha/src'
make[1]: Leaving directory '/tmp/Rtmp7FFyx2/R.INSTALL1839a63db5aad3/eha/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-eha/00new/eha/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘eha’
    finding HTML links ... done
    EV                                      html  
    Gompertz                                html  
    HiscoHisclass                           html  
    Loglogistic                             html  
    Lognormal                               html  
    Pch                                     html  
    SurvSplit                               html  
    Weibull                                 html  
    aftreg                                  html  
    aftreg.fit                              html  
    age.window                              html  
    cal.window                              html  
    check.dist                              html  
    check.surv                              html  
    child                                   html  
    compHaz                                 html  
    coxfunk                                 html  
    coxreg                                  html  
    coxreg.fit                              html  
    coxreg2                                 html  
    cro                                     html  
    eha-package                             html  
    fert                                    html  
    frail.fit                               html  
    geome.fit                               html  
    hazards                                 html  
    import_Surv                             html  
    import_strata                           html  
    infants                                 html  
    join.spells                             html  
    logrank                                 html  
    logrye                                  html  
    ltx                                     html  
    ltx2                                    html  
    make.communal                           html  
    makeham                                 html  
    male.mortality                          html  
    mlreg                                   html  
    mort                                    html  
    oe                                      html  
    oldmort                                 html  
    pchreg                                  html  
    perstat                                 html  
    phfunc                                  html  
    phreg                                   html  
    phreg.fit                               html  
    piecewise                               html  
    plot.aftreg                             html  
    plot.coxreg                             html  
    plot.hazdata                            html  
    plot.logrank                            html  
    plot.phreg                              html  
    plot.tpchreg                            html  
    plot.weibreg                            html  
    plotHaz                                 html  
    print.aftreg                            html  
    print.coxreg                            html  
    print.logrank                           html  
    print.phreg                             html  
    print.risksets                          html  
    print.summary.aftreg                    html  
    print.summary.coxreg                    html  
    print.summary.phreg                     html  
    print.summary.tpchreg                   html  
    print.tpchreg                           html  
    print.weibreg                           html  
    regtable                                html  
    risksets                                html  
    scania                                  html  
    summary.aftreg                          html  
    summary.coxreg                          html  
    summary.phreg                           html  
    summary.tpchreg                         html  
    summary.weibreg                         html  
    swedeaths                               html  
    swepop                                  html  
    table.events                            html  
    toBinary                                html  
    toDate                                  html  
    toTime                                  html  
    toTpch                                  html  
    tpchreg                                 html  
    weibreg                                 html  
    weibreg.fit                             html  
    wfunk                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (eha)