• using R version 4.5.1 Patched (2025-10-13 r88918)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.3.0-8) 14.3.0     GNU Fortran (Debian 14.3.0-8) 14.3.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘egor/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘egor’ version ‘1.24.2’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘egor’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... NOTE   Missing dependency on R >= 4.1.0 because package code uses the pipe   |> or function shorthand \(...) syntax added in R 4.1.0.   File(s) using such syntax:     ‘clustered.graphs.R’
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking whether startup messages can be suppressed ... [3s/5s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [24s/33s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   as_tibble.egor.Rd: tbl_svy, as_tibble, as_survey   egor.Rd: as_tibble, tibble, tbl_svy   rowlist.Rd: tibble Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [1s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [22s/34s] OK Examples with CPU (user + system) or elapsed time > 5s                       user system elapsed subset.egor 3.554 0.038 5.073 vis_clustered_graphs 3.087 0.001 5.754
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [50s/62s] OK   Running ‘testthat.R’ [50s/62s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [37s/53s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘egor_allbus.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘egor_allbus.Rmd’ --- re-building ‘qualtrics.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘qualtrics.Rmd’ --- re-building ‘using_egor.Rmd’ using rmarkdown Quitting from using_egor.Rmd:221-241 [unnamed-chunk-16] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `gray()`: ! invalid gray level, must be in [0,1]. --- Backtrace:     ▆  1. └─egor::vis_clustered_graphs(...)  2. └─egor (local) plotGraph(graph, center, this_layout)  3. └─grDevices::gray(1 - betw_grp_dens/max(betw_grp_dens), alpha = 0.7) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'using_egor.Rmd' failed with diagnostics: invalid gray level, must be in [0,1]. --- failed re-building ‘using_egor.Rmd’ SUMMARY: processing the following file failed:   ‘using_egor.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [8s/10s] OK
• checking HTML version of manual ... [2s/4s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 2 NOTEs