* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘dplR’ ...
** package ‘dplR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-13) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp2V4zhn/R.INSTALL2f41f54c307b08/dplR/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adsc.c -o adsc.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c adsf.f95 -o adsf.o
adsf.f95:27:34:
27 | real(dp) :: v,arg,rn,d1,d2,a,c1,c2,p,pct,pi,sum
| 1
Warning: Array ‘a’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
adsf.f95:27:42:
27 | real(dp) :: v,arg,rn,d1,d2,a,c1,c2,p,pct,pi,sum
| 1
Warning: Array ‘p’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c capsc.c -o capsc.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c capsf.f95 -o capsf.o
capsf.f95:44:31:
44 | real(dp) v,arg,rn,d1,d2,a,c1,c2,p,pi,sum,pp
| 1
Warning: Array ‘a’ at (1) is larger than limit set by ‘-fmax-stack-var-size=’, moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the ‘-fmax-stack-var-size=’ limit (or use ‘-frecursive’, which implies unlimited ‘-fmax-stack-var-size’) - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dplR.c -o dplR.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c exactmean.c -o exactmean.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c exactsum.c -o exactsum.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gini.c -o gini.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rcompact.c -o rcompact.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c readloop.c -o readloop.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c redfit.c -o redfit.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sens.c -o sens.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tbrm.c -o tbrm.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o dplR.so adsc.o adsf.o capsc.o capsf.o dplR.o exactmean.o exactsum.o gini.o init.o rcompact.o readloop.o redfit.o sens.o tbrm.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp2V4zhn/R.INSTALL2f41f54c307b08/dplR/src'
make[1]: Entering directory '/tmp/Rtmp2V4zhn/R.INSTALL2f41f54c307b08/dplR/src'
make[1]: Leaving directory '/tmp/Rtmp2V4zhn/R.INSTALL2f41f54c307b08/dplR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-dplR/00new/dplR/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘dplR’
finding HTML links ... done
ads html
anos1 html
as.rwl html
bai.in html
bai.out html
ca533 html
cana157 html
caps html
ccf.series.rwl html
chron html
chron.ars html
chron.ci html
chron.stabilized html
cms html
co021 html
combine.rwl html
common.interval html
corr.rwl.seg html
corr.series.seg html
csv2rwl html
detrend html
detrend.series html
dplR-defunct html
dplR-package html
ffcsaps html
fill.internal.NA html
gini.coef html
glk html
gp.d2pith html
gp.dbh html
gp.po html
gp.rwl html
hanning html
i.detrend html
i.detrend.series html
insert.ring html
interseries.cor html
latexDate html
latexify html
finding level-2 HTML links ... done
morlet html
net html
nm046 html
pass.filt html
plot.crn html
plot.crs html
plot.rwl html
po.to.wc html
pointer html
powt html
print.redfit html
print.rwl.report html
rasterPlot html
rcs html
read.compact html
read.crn html
read.fh html
read.ids html
read.rwl html
read.tridas html
read.tucson html
redfit html
rwi.stats.running html
rwl.report html
rwl.stats html
sea html
seg.plot html
sens1 html
sens2 html
series.rwl.plot html
sgc html
skel.plot html
spag.plot html
ssf html
sss html
strip.rwl html
tbrm html
time.rwl html
treeMean html
tridas.vocabulary html
uuid.gen html
wa082 html
wavelet.plot html
wc.to.po html
write.compact html
write.crn html
write.rwl html
write.tridas html
write.tucson html
xdate.floater html
xskel.ccf.plot html
xskel.plot html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dplR)