* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘dmbc’ ...
** this is package ‘dmbc’ version ‘1.0.3’
** package ‘dmbc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpe9YIjJ/R.INSTALL5720962b98368/dmbc/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c distrib.cpp -o distrib.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c dmbc.cpp -o dmbc.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c matrix_utils.cpp -o matrix_utils.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc.cpp -o mcmc.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c relabel.cpp -o relabel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o dmbc.so distrib.o dmbc.o init.o matrix_utils.o mcmc.o relabel.o utils.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpe9YIjJ/R.INSTALL5720962b98368/dmbc/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpe9YIjJ/R.INSTALL5720962b98368/dmbc/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpe9YIjJ/R.INSTALL5720962b98368/dmbc/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-dmbc/00new/dmbc/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘dmbc’
finding HTML links ... done
adjust_x html
animals html
bmds html
bmds_get_x_mode html
check_list_na html
clusters-dmbc_config-method html
comp_ssr html
dmbc-package html
dmbc html
dmbc_IC html
dmbc_check_groups html
dmbc_config-class html
dmbc_control html
dmbc_data-class html
dmbc_fit-class html
dmbc_fit html
dmbc_fit_list-class html
dmbc_fit_list_to_list html
dmbc_fit_list_to_mcmc.list html
dmbc_fit_to_mcmc html
dmbc_get_configuration html
dmbc_get_map html
dmbc_get_ml html
dmbc_get_postmean html
dmbc_get_postmedian html
dmbc_ic-class html
dmbc_init html
dmbc_logLik html
dmbc_logLik_rbmds html
dmbc_match_groups html
dmbc_model-class html
dmbc_prior html
initialize-dmbc_config-method html
initialize-dmbc_data-method html
initialize-dmbc_fit-method html
initialize-dmbc_fit_list-method html
initialize-dmbc_ic-method html
initialize-dmbc_model-method html
kinship html
mdsic html
plot-dmbc_config-ANY-method html
plot-dmbc_data-ANY-method html
plot-dmbc_fit-ANY-method html
plot-dmbc_fit_list-ANY-method html
plot-dmbc_ic-ANY-method html
show-dmbc_config-method html
show-dmbc_data-method html
show-dmbc_fit-method html
show-dmbc_fit_list-method html
show-dmbc_ic-method html
show-dmbc_model-method html
simdiss html
subset-dmbc_fit-method html
subset-dmbc_fit_list-method html
summary-dmbc_config-method html
summary-dmbc_data-method html
summary-dmbc_fit-method html
summary-dmbc_fit_list-method html
summary-dmbc_ic-method html
update-dmbc_ic-method html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dmbc)