* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘dfms’ ...
** this is package ‘dfms’ version ‘0.3.1’
** package ‘dfms’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxdBBzU/R.INSTALL3727ed7d19d4ba/dfms/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c EM_algorithm.cpp -o EM_algorithm.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ExportSymbols.cpp -o ExportSymbols.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c KalmanFiltering.cpp -o KalmanFiltering.o
KalmanFiltering.cpp: In function ‘Rcpp::List SKF(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, arma::colvec, arma::mat, bool)’:
KalmanFiltering.cpp:89:65: warning: ‘static out_eT arma::conv_to<out_eT>::from(const arma::Base<eT2, expr>&, const typename arma::arma_not_cx<in_eT>::result*) [with in_eT = double; T1 = arma::Glue<arma::Glue<arma::Op<arma::Col<double>, arma::op_htrans>, arma::Mat<double>, arma::glue_times>, arma::Col<double>, arma::glue_times>; out_eT = double; typename arma::arma_not_cx<in_eT>::result = double]’ is deprecated: replace conv_to<...>::from(X) with as_scalar(X) [-Wdeprecated-declarations]
89 | if(detS > 0) loglik += log(detS) - conv_to<double>::from(et.t() * S * et) - dn;
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo:496,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57,
from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/RcppArmadillo.h:32,
from KalmanFiltering.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_conv_to.hpp:72:1: note: declared here
72 | conv_to<out_eT>::from(const Base<in_eT, T1>& in, const typename arma_not_cx<in_eT>::result* junk)
| ^~~~~~~~~~~~~~~
KalmanFiltering.cpp: In function ‘Rcpp::List SKFS(arma::mat, arma::mat, arma::mat, arma::mat, arma::mat, arma::colvec, arma::mat, bool)’:
KalmanFiltering.cpp:262:65: warning: ‘static out_eT arma::conv_to<out_eT>::from(const arma::Base<eT2, expr>&, const typename arma::arma_not_cx<in_eT>::result*) [with in_eT = double; T1 = arma::Glue<arma::Glue<arma::Op<arma::Col<double>, arma::op_htrans>, arma::Mat<double>, arma::glue_times>, arma::Col<double>, arma::glue_times>; out_eT = double; typename arma::arma_not_cx<in_eT>::result = double]’ is deprecated: replace conv_to<...>::from(X) with as_scalar(X) [-Wdeprecated-declarations]
262 | if(detS > 0) loglik += log(detS) - conv_to<double>::from(et.t() * S * et) - dn; // Standard Kalman Filter Likelihood
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include/current/armadillo_bits/fn_conv_to.hpp:72:1: note: declared here
72 | conv_to<out_eT>::from(const Base<in_eT, T1>& in, const typename arma_not_cx<in_eT>::result* junk)
| ^~~~~~~~~~~~~~~
KalmanFiltering.cpp:288:18: warning: ‘n_c’ may be used uninitialized [-Wmaybe-uninitialized]
288 | K = (n_c == 0) ? mat(rp, rp, fill::zeros) : K * Ci;
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
KalmanFiltering.cpp:197:7: note: ‘n_c’ was declared here
197 | int n_c;
| ^~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c helper.cpp -o helper.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o dfms.so EM_algorithm.o ExportSymbols.o KalmanFiltering.o RcppExports.o helper.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxdBBzU/R.INSTALL3727ed7d19d4ba/dfms/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxdBBzU/R.INSTALL3727ed7d19d4ba/dfms/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxdBBzU/R.INSTALL3727ed7d19d4ba/dfms/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-dfms/00new/dfms/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘dfms’
finding HTML links ... done
BM14_Models html
DFM html
FIS html
ICr html
SKF html
SKFS html
ainv html
as.data.frame.dfm html
dfms-package html
dot-VAR html
em_converged html
plot.dfm html
predict.dfm html
residuals.dfm html
summary.dfm html
tsnarmimp html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dfms)