* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ddpcr’ ...
** package ‘ddpcr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘ddpcr’
finding HTML links ... done
WELL_ID_REGEX html
analysis_complete html
analyze html
bind_df_ends html
calc_negative_freq_simple html
calculate_concentration html
calculate_concentration_single html
calculate_neg_freq_single html
calculate_negative_freqs html
capitalize html
cat0 html
check_step html
classify_droplets html
classify_droplets.pnpp_experiment html
classify_droplets_single html
classify_droplets_single.pnpp_experiment
html
classify_thresholds html
cluster html
cluster_name html
clusters html
col_to_num html
custom_thresholds html
ddpcr-package html
ddpcr_plate html
define_clusters html
define_clusters.custom_thresholds html
define_clusters.ddpcr_plate html
define_clusters.pnpp_experiment html
define_params html
define_params.custom_thresholds html
define_params.ddpcr_plate html
define_params.fam_positive_pnpp html
define_params.hex_positive_pnpp html
define_params.pnpp_experiment html
define_params.wildtype_mutant_pnpp html
define_steps html
define_steps.custom_thresholds html
define_steps.ddpcr_plate html
define_steps.pnpp_experiment html
diff.point2d html
err_msg html
fam_positive_pnpp html
get_col html
get_empty_cutoff html
get_empty_cutoff.ddpcr_plate html
get_empty_cutoff.pnpp_experiment html
get_filled_border html
get_filled_drops html
get_outlier_cutoff html
get_outlier_cutoff.ddpcr_plate html
get_row html
get_single_well html
get_wells_btwn html
grapes-btwn-grapes html
grapes-greater-than-grapes html
has_signif_negative_cluster html
has_step html
hex_positive_pnpp html
is_dir html
is_dirty html
is_empty_plate html
is_file html
is_range html
is_well_success html
is_well_success.ddpcr_plate html
is_well_success.pnpp_experiment html
launch html
load_plate html
local_maxima html
local_minima html
lol_to_df html
mark_clusters html
merge_dfs_overwrite_col html
meta_var_name html
move_back html
move_front html
msg html
name html
named_vec_to_df html
new_plate html
next_step html
normalize_to_rds html
num_to_col html
num_to_row html
other_dim html
params html
parent_plate_type html
parent_plate_type.ddpcr_plate html
parent_plate_type.default html
parent_plate_type.fam_positive_pnpp html
parent_plate_type.hex_positive_pnpp html
parent_plate_type.wildtype_mutant_pnpp
html
plate_data-set html
plate_data html
plate_meta-set html
plate_meta html
plate_types html
plot.custom_thresholds html
plot.ddpcr_plate html
plot.pnpp_experiment html
plot.wildtype_mutant_pnpp html
pnpp_experiment html
point2d html
positive_dim html
positive_dim_var html
positive_name html
print.ddpcr_plate html
quiet html
range_list_to_vec html
range_to_endpoints html
range_to_seq html
reclassify_droplets html
reclassify_droplets.pnpp_experiment html
reclassify_droplets_single html
reclassify_droplets_single.pnpp_experiment
html
remove_empty html
remove_empty.ddpcr_plate html
remove_empty.pnpp_experiment html
remove_failures html
remove_failures.ddpcr_plate html
remove_outliers html
remove_outliers.ddpcr_plate html
reset html
row_to_num html
sample_data html
save_plate html
set_default_params html
status html
step html
step_begin html
step_end html
step_name html
steps html
subset.ddpcr_plate html
thresholds html
type html
unanalyzed_clusters html
variable_dim html
variable_dim_var html
warn_msg html
well_info html
wells_mutant html
wells_negative html
wells_positive html
wells_success html
wells_used html
wells_wildtype html
wildtype_mutant_pnpp html
x_threshold html
x_var html
y_threshold html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ddpcr)