* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘dbnR’ ...
** package ‘dbnR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
using C++11
make[1]: Entering directory '/tmp/Rtmp4KvSyc/R.INSTALL209ba555ec74e/dbnR/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gauss_transform.cpp -o gauss_transform.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c structure_learning_natPsoho.cpp -o structure_learning_natPsoho.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c structure_learning_psoho.cpp -o structure_learning_psoho.o
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o dbnR.so RcppExports.o gauss_transform.o structure_learning_natPsoho.o structure_learning_psoho.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp4KvSyc/R.INSTALL209ba555ec74e/dbnR/src'
make[1]: Entering directory '/tmp/Rtmp4KvSyc/R.INSTALL209ba555ec74e/dbnR/src'
make[1]: Leaving directory '/tmp/Rtmp4KvSyc/R.INSTALL209ba555ec74e/dbnR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-dbnR/00new/dbnR/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘dbnR’
finding HTML links ... done
AIC.dbn html
AIC.dbn.fit html
BIC.dbn html
BIC.dbn.fit html
Causlist html
Particle html
Position html
PsoCtrl html
Velocity html
acc_successions html
add_attr_to_fit html
all.equal.dbn html
all.equal.dbn.fit html
approx_prediction_step html
approximate_inference html
as.character.dbn html
as_named_vector html
bn_translate_exp html
calc_mu html
calc_mu_cpp html
calc_sigma html
calc_sigma_cpp html
cash-set-.dbn.fit html
check_time0_formatted html
cl_to_arc_matrix_cpp html
coef.dbn.fit html
create_blacklist html
create_causlist_cpp html
create_natcauslist_cpp html
crop_names_cpp html
cte_times_vel_cpp html
degree html
degree.bn html
degree.bn.fit html
degree.dbn html
degree.dbn.fit html
dmmhc html
finding level-2 HTML links ... done
dynamic_ordering html
exact_inference html
exact_inference_backwards html
exact_prediction_step html
expand_time_nodes html
filter_same_cycle html
filtered_fold_dt html
fit_dbn_params html
fitted.dbn.fit html
fold_dt html
fold_dt_rec html
forecast_ts html
generate_random_network_exp html
init_cl_cpp html
init_list_cpp html
initialize_cl_cpp html
learn_dbn_struc html
logLik.dbn html
logLik.dbn.fit html
mean.dbn.fit html
merge_nets html
motor html
mvn_inference html
natCauslist html
natParticle html
natPosition html
natPsoCtrl html
natPsoho html
natVelocity html
nat_cl_to_arc_matrix_cpp html
nat_cte_times_vel_cpp html
nat_pos_minus_pos_cpp html
nat_pos_plus_vel_cpp html
nat_vel_plus_vel_cpp html
node_levels html
nodes-set-.bn html
nodes-set-.bn.fit html
nodes-set-.dbn html
nodes-set-.dbn.fit html
nodes-set html
nodes html
nodes.bn html
nodes.bn.fit html
nodes.dbn html
nodes.dbn.fit html
nodes_gen_exp html
one_hot html
one_hot_cpp html
ordering_gen_exp html
plot.dbn html
plot.dbn.fit html
plot_dynamic_network html
plot_static_network html
pos_minus_pos_cpp html
pos_plus_vel_cpp html
predict.dbn.fit html
predict_bn html
predict_dt html
print.dbn html
print.dbn.fit html
psoho html
randomize_vl_cpp html
rbn.dbn.fit html
recount_arcs_exp html
reduce_freq html
rename_nodes_cpp html
residuals.dbn.fit html
score html
score.bn html
score.dbn html
shift_values html
sigma.dbn.fit html
smooth_ts html
sub-subset-.dbn.fit html
time_rename html
trunc_geom html
vel_plus_vel_cpp html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dbnR)