* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘datom’ ...
** this is package ‘datom’ version ‘0.2.0’
** package ‘datom’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘datom’
finding HTML links ... done
datom-package html
datom_add_member html
datom_assemble_set html
datom_check_hashable html
datom_clone html
datom_example_cutoffs html
datom_example_data html
datom_fetch_member html
datom_get_conn html
datom_get_lineage html
datom_get_parents html
datom_get_set html
datom_history html
datom_init_repo html
datom_lineage_union html
datom_list html
datom_list_members html
datom_member html
datom_parent html
datom_projects html
datom_pull html
datom_read html
datom_remove_members html
datom_repo_attach_governance html
datom_repo_commit html
datom_repo_delete html
datom_repo_push html
datom_repo_set_data_store html
datom_repository_check html
datom_status html
datom_storage_copy html
datom_storage_delete_prefix html
datom_storage_list html
datom_storage_read_json html
datom_storage_verify html
datom_store html
datom_store_local html
datom_store_s3 html
datom_store_s3_creds html
datom_structure_members html
datom_summary html
datom_sync html
datom_sync_manifest html
datom_update_members html
datom_validate html
datom_write html
datom_write_set html
dot-datom_abbreviate_sha html
dot-datom_append_edits html
dot-datom_artifact_meta_key html
dot-datom_artifact_payload_key html
dot-datom_artifact_snapshot_key html
dot-datom_artifacts_of_kind html
dot-datom_assign_leaf html
dot-datom_backend_label html
dot-datom_build_init_conn html
dot-datom_build_metadata html
dot-datom_build_s3_uri html
dot-datom_build_set_metadata html
dot-datom_build_storage_key html
dot-datom_canonical_hash html
dot-datom_canonical_set_hash html
dot-datom_carry_unknown_fields html
dot-datom_check_artifact_kind html
dot-datom_check_data_reachable html
dot-datom_check_document_vocabulary html
dot-datom_check_git2r html
dot-datom_check_git_current html
dot-datom_check_git_reachable html
dot-datom_check_git_remote html
dot-datom_check_git_verb_conn html
dot-datom_check_include_paths html
dot-datom_check_namespace_free html
dot-datom_check_project_field html
dot-datom_check_project_schema html
dot-datom_check_ref_current html
dot-datom_check_schema_version html
dot-datom_check_set_parents html
dot-datom_check_set_payload html
dot-datom_check_set_project html
dot-datom_check_set_write_gates html
dot-datom_check_write_entry html
dot-datom_check_writer_floor html
dot-datom_class_label html
dot-datom_clone_artifact_names html
dot-datom_col_digest html
dot-datom_column_kind html
dot-datom_commit_and_mirror html
dot-datom_compute_data_sha html
dot-datom_compute_metadata_sha html
dot-datom_compute_original_file_sha html
dot-datom_conn_for html
dot-datom_copy_one html
dot-datom_create_github_repo html
dot-datom_create_governance_json html
dot-datom_create_ref html
dot-datom_current_artifact_versions html
dot-datom_current_artifacts html
dot-datom_declared_project html
dot-datom_delete_github_repo html
dot-datom_draft_member_clash html
dot-datom_drop_empty_tags html
dot-datom_edit_conns html
dot-datom_edit_lines html
dot-datom_edit_log_fields html
dot-datom_edit_members html
dot-datom_empty_member_frame html
dot-datom_empty_set html
dot-datom_encode_character html
dot-datom_encode_numeric html
dot-datom_expand_member_tags html
dot-datom_find_member html
dot-datom_forget_set_identity html
dot-datom_format_tag_line html
dot-datom_get_conn_developer html
dot-datom_get_conn_reader html
dot-datom_git_ahead html
dot-datom_git_author html
dot-datom_git_branch html
dot-datom_git_commit html
dot-datom_git_commit_shas_by_version html
dot-datom_git_credentials html
dot-datom_git_ensure_local_identity html
dot-datom_git_ignored html
dot-datom_git_pull html
dot-datom_git_push html
dot-datom_github_username html
dot-datom_gov_clone_exists html
dot-datom_gov_clone_init html
dot-datom_gov_clone_open html
dot-datom_gov_list_projects html
dot-datom_gov_project_path html
dot-datom_gov_validate_remote html
dot-datom_has_changes html
dot-datom_hash_recourse html
dot-datom_history_versions html
dot-datom_history_with_commit_shas html
dot-datom_id_text html
dot-datom_is_text_scalar html
dot-datom_line_bullets html
dot-datom_lineage_union html
dot-datom_link_failure html
dot-datom_local_delete html
dot-datom_local_delete_prefix html
dot-datom_local_download html
dot-datom_local_exists html
dot-datom_local_list_objects html
dot-datom_local_path html
dot-datom_local_read_json html
dot-datom_local_upload html
dot-datom_local_write_json html
dot-datom_lookup_history_document_sha html
dot-datom_lookup_history_object_sha html
dot-datom_lookup_history_parquet_sha html
dot-datom_manifest_skeleton html
dot-datom_manifest_upgrade html
dot-datom_manifest_upgrade_v1_to_v2 html
dot-datom_mask_secret html
dot-datom_match_member_id html
dot-datom_member_as_link html
dot-datom_member_has_tags html
dot-datom_member_id html
dot-datom_member_lines html
dot-datom_member_link html
dot-datom_member_parents html
dot-datom_member_record html
dot-datom_member_shape html
dot-datom_metadata_at_commit html
dot-datom_metadata_known_fields html
dot-datom_metadata_sha_from_fields html
dot-datom_normalize_prefix html
dot-datom_notify_manifest_upgraded html
dot-datom_order_set_members html
dot-datom_parent_record html
dot-datom_parents_from_set html
dot-datom_parse_ref html
dot-datom_parse_s3_uri html
dot-datom_prior_metadata html
dot-datom_push_metadata_s3 html
dot-datom_read_governance_json_local html
dot-datom_read_manifest html
dot-datom_read_metadata html
dot-datom_read_parquet html
dot-datom_read_set_member html
dot-datom_read_set_members html
dot-datom_read_set_payload html
dot-datom_read_string_array html
dot-datom_read_tag_map html
dot-datom_rebuild_manifest html
dot-datom_rebuild_manifest_entry html
dot-datom_rebuild_member_count html
dot-datom_reconcile_set_name html
dot-datom_recorded_current_version html
dot-datom_refuse_file_arg_on_product html
dot-datom_refuse_import_on_product html
dot-datom_refuse_own_project_source html
dot-datom_refuse_sources_on_ordinary html
dot-datom_render_readme html
dot-datom_repoint_member html
dot-datom_report_member_removals html
dot-datom_report_member_updates html
dot-datom_report_sync_apply html
dot-datom_report_sync_preview html
dot-datom_require_gov html
dot-datom_resolve_data_location html
dot-datom_resolve_document_sha html
dot-datom_resolve_gov_local_path html
dot-datom_resolve_or_default_gov_path html
dot-datom_resolve_parquet_sha html
dot-datom_resolve_ref html
dot-datom_resolve_ref_from_clone html
dot-datom_resolve_version html
dot-datom_s3_client html
dot-datom_s3_delete_prefix html
dot-datom_s3_download html
dot-datom_s3_exists html
dot-datom_s3_list_objects html
dot-datom_s3_read_json html
dot-datom_s3_upload html
dot-datom_s3_write_json html
dot-datom_select_members html
dot-datom_set_add_record html
dot-datom_set_commit_messages html
dot-datom_set_members html
dot-datom_set_project html
dot-datom_storage_artifact_names html
dot-datom_storage_byte_size html
dot-datom_storage_content_hash html
dot-datom_storage_delete_governance_json
html
dot-datom_storage_delete_prefix html
dot-datom_storage_download html
dot-datom_storage_exists html
dot-datom_storage_list_objects html
dot-datom_storage_read_governance_json
html
dot-datom_storage_read_json html
dot-datom_storage_rel_key html
dot-datom_storage_upload html
dot-datom_storage_write_governance_json
html
dot-datom_storage_write_json html
dot-datom_store_backend html
dot-datom_store_constructor_snippet html
dot-datom_store_region html
dot-datom_store_root html
dot-datom_stored_commit_shas html
dot-datom_strip_member_links html
dot-datom_sv1_as_strings html
dot-datom_sv1_h html
dot-datom_sv1_hex html
dot-datom_sv1_map html
dot-datom_sv1_member html
dot-datom_sv1_set html
dot-datom_sv1_str html
dot-datom_sv1_strset html
dot-datom_sync_apply_frame html
dot-datom_sync_check_kind html
dot-datom_sync_context html
dot-datom_sync_data_metadata html
dot-datom_sync_governance_json html
dot-datom_sync_metadata html
dot-datom_sync_name_matches html
dot-datom_sync_new_member html
dot-datom_sync_preview_cols html
dot-datom_sync_read_set html
dot-datom_sync_refuse_duplicate_rows html
dot-datom_sync_refuse_missing_source html
dot-datom_sync_refuse_stale html
dot-datom_sync_set_apply html
dot-datom_sync_set_name html
dot-datom_sync_set_preview html
dot-datom_sync_source_artifacts html
dot-datom_tag_pairs html
dot-datom_tag_values html
dot-datom_tidy_set_payload html
dot-datom_tidy_tag_map html
dot-datom_tidy_tag_value html
dot-datom_validate_github_pat html
dot-datom_validate_members html
dot-datom_validate_name html
dot-datom_validate_parents html
dot-datom_validate_rel_key html
dot-datom_validate_s3_store html
dot-datom_validate_sha html
dot-datom_validate_source_lineage html
dot-datom_validate_tag_map html
dot-datom_verify_one html
dot-datom_warn_commit_shas_lost html
dot-datom_warn_manifest_rebuilt html
dot-datom_write_governance_json_local html
dot-datom_write_metadata html
dot-datom_write_metadata_local html
dot-is_datom_store_component html
is_datom_conn html
is_datom_store html
is_datom_store_local html
is_datom_store_s3 html
is_datom_store_s3_creds html
is_valid_datom_repo html
new_datom_conn html
print.datom_conn html
print.datom_link html
print.datom_set html
print.datom_store html
print.datom_store_local html
print.datom_store_s3 html
print.datom_store_s3_creds html
print.datom_summary html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (datom)