* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘cylcop’ ... ** this is package ‘cylcop’ version ‘0.2.0’ ** package ‘cylcop’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘cylcop’ finding HTML links ... done Cramer_vonMises html Rd warning: Cramer_vonMises.Rd:19: missing link ‘Copula-class’ Rd warning: Cramer_vonMises.Rd:35: missing link ‘Copula-class’ Cylcop html Rd warning: Cylcop.Rd:95: missing link ‘Copula-class’ Rd warning: Cylcop.Rd:77: missing link ‘Copula-class’ Rd warning: Cylcop.Rd:98: missing link ‘Copula-class’ Rd warning: Cylcop.Rd:106: missing link ‘Copula-class’ angstep2xy html bearing html ccylcop html Rd warning: ccylcop.Rd:34: missing link ‘Copula-class’ Rd warning: ccylcop.Rd:56: missing link ‘Copula-class’ cor_cyl html cyl_copula-class html Rd warning: cyl_copula-class.Rd:9: missing link ‘Copula-class’ cyl_cubsec-class html cyl_cubsec html cyl_quadsec-class html cyl_quadsec html cyl_rect_combine-class html Rd warning: cyl_rect_combine-class.Rd:9: missing link ‘Copula-class’ Rd warning: cyl_rect_combine-class.Rd:13: missing link ‘Copula-class’ Rd warning: cyl_rect_combine-class.Rd:45: missing link ‘Copula-class’ Rd warning: cyl_rect_combine-class.Rd:50: missing link ‘Copula-class’ Rd warning: cyl_rect_combine-class.Rd:69: missing link ‘Copula-class’ cyl_rect_combine html Rd warning: cyl_rect_combine.Rd:16: missing link ‘Copula-class’ Rd warning: cyl_rect_combine.Rd:21: missing link ‘Copula-class’ cyl_rot_combine-class html Rd warning: cyl_rot_combine-class.Rd:10: missing link ‘Copula-class’ Rd warning: cyl_rot_combine-class.Rd:31: missing link ‘Copula-class’ Rd warning: cyl_rot_combine-class.Rd:45: missing link ‘Copula-class’ cyl_rot_combine html Rd warning: cyl_rot_combine.Rd:10: missing link ‘Copula-class’ cyl_vonmises-class html cyl_vonmises html cylcop-deprecated html cylcop-package html cylcop_get_option html cylcop_set_option html dens html fit_angle html fit_cylcop_cor html fit_cylcop_ml html Rd warning: fit_cylcop_ml.Rd:87: missing link ‘Copula-class’ Rd warning: fit_cylcop_ml.Rd:88: missing link ‘fitCopula’ fit_steplength html full2half_circ html Rd warning: full2half_circ.Rd:11: missing link ‘circular’ gammamix html half2full_circ html Rd warning: half2full_circ.Rd:11: missing link ‘circular’ joint html Rd warning: joint.Rd:22: missing link ‘Copula-class’ lnormmix html mi_cyl html mle.vonmisesmix html normmix html numerical_conditional_cop html Rd warning: numerical_conditional_cop.Rd:15: missing link ‘Copula-class’ numerical_inv_conditional_cop html Rd warning: numerical_inv_conditional_cop.Rd:15: missing link ‘Copula-class’ opt_auto html opt_circ_bw html opt_lin_bw html plot-cyl_copula-missing-method html plot_circ_hist html plot_cop_scat html plot_cop_surf html Rd warning: plot_cop_surf.Rd:16: missing link ‘Copula-class’ plot_joint_box html plot_joint_circ html plot_joint_scat html plot_track html prob-cyl_copula-method html set_cop_param html show-cyl_copula-method html traj_get html traj_sim html vonmisesmix html wasserstein html Rd warning: wasserstein.Rd:18: missing link ‘Copula-class’ Rd warning: wasserstein.Rd:21: missing link ‘Copula-class’ weibullmix html wrappedcauchy html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cylcop)