* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cxhull’ ...
** package ‘cxhull’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-24) 13.2.0’
make[1]: Entering directory '/tmp/Rtmpj4Ha3l/R.INSTALL1ce5e764551022/cxhull/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c convexhull.c -o convexhull.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cxhull_edges.c -o cxhull_edges.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geom2_r.c -o geom2_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geom_r.c -o geom_r.o
geom_r.c: In function ‘qh_projectpoint’:
geom_r.c:974:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
974 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
geom_r.c: In function ‘qh_setfacetplane’:
geom_r.c:1011:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
1011 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c global_r.c -o global_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c io_r.c -o io_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libqhull_r.c -o libqhull_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem_r.c -o mem_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c merge_r.c -o merge_r.o
merge_r.c: In function ‘qh_all_merges’:
merge_r.c:222:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
222 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
merge_r.c: In function ‘qh_appendmergeset’:
merge_r.c:330:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
330 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
merge_r.c: In function ‘qh_mergecycle_ridges’:
merge_r.c:2198:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
2198 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly2_r.c -o poly2_r.o
poly2_r.c: In function ‘qh_delridge’:
poly2_r.c:1291:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
1291 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c poly_r.c -o poly_r.o
poly_r.c: In function ‘qh_delfacet’:
poly_r.c:253:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
253 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
poly_r.c: In function ‘qh_makenew_nonsimplicial’:
poly_r.c:591:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
591 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
poly_r.c: In function ‘qh_newfacet’:
poly_r.c:1061:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
1061 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
poly_r.c: In function ‘qh_newridge’:
poly_r.c:1093:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
1093 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c qset_r.c -o qset_r.o
qset_r.c: In function ‘qh_setfree’:
qset_r.c:723:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
723 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */
| ^~~~~~~~~
qset_r.c: In function ‘qh_setnew’:
qset_r.c:924:10: warning: variable ‘freelistp’ set but not used [-Wunused-but-set-variable]
924 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */
| ^~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c random_r.c -o random_r.o
random_r.c: In function ‘qh_argv_to_command’:
random_r.c:84:6: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation]
84 | }else
| ^~~~
random_r.c:86:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’
86 | strcat(command, s);
| ^~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stat_r.c -o stat_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c user_r.c -o user_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c usermem_r.c -o usermem_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c userprintf_r.c -o userprintf_r.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.c -o utils.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cxhull.so convexhull.o cxhull_edges.o geom2_r.o geom_r.o global_r.o init.o io_r.o libqhull_r.o mem_r.o merge_r.o poly2_r.o poly_r.o qset_r.o random_r.o stat_r.o user_r.o usermem_r.o userprintf_r.o utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpj4Ha3l/R.INSTALL1ce5e764551022/cxhull/src'
make[1]: Entering directory '/tmp/Rtmpj4Ha3l/R.INSTALL1ce5e764551022/cxhull/src'
make[1]: Leaving directory '/tmp/Rtmpj4Ha3l/R.INSTALL1ce5e764551022/cxhull/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cxhull/00new/cxhull/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘cxhull’
finding HTML links ... done
EdgesAB html
EdgesXYZ html
TrianglesXYZ html
VerticesXYZ html
cxhull html
cxhullEdges html
daVinciSphere html
dihedralAngles html
hexacosichoron html
hullMesh html
hullSummary html
plotConvexHull3d html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘cxhull’ as ‘cxhull_0.7.4_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (cxhull)