* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cuda.ml’ ...
** this is package ‘cuda.ml’ version ‘0.3.2’
** package ‘cuda.ml’ successfully unpacked and MD5 sums checked
** using staged installation
** preparing to configure package 'cuda.ml' ...
*** configured file: 'src/CMakeLists.txt.in' => 'src/CMakeLists.txt'
*** configured file: 'src/Makevars.in' => 'src/Makevars'
** finished configure for package 'cuda.ml'
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c agglomerative_clustering.cpp -o agglomerative_clustering.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cd.cpp -o cd.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cuml_utils.cpp -o cuml_utils.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dbscan.cpp -o dbscan.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c example_linear_model.cpp -o example_linear_model.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fil.cpp -o fil.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kmeans.cpp -o kmeans.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c knn.cpp -o knn.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lm_predict.cpp -o lm_predict.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ols.cpp -o ols.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pca.cpp -o pca.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c qn.cpp -o qn.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_forest_classifier.cpp -o random_forest_classifier.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_forest_regressor.cpp -o random_forest_regressor.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_projection.cpp -o random_projection.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ridge.cpp -o ridge.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sgd.cpp -o sgd.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svm_classifier.cpp -o svm_classifier.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svm_regressor.cpp -o svm_regressor.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsne.cpp -o tsne.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsvd.cpp -o tsvd.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c umap.cpp -o umap.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cuda.ml.so RcppExports.o agglomerative_clustering.o cd.o cuml_utils.o dbscan.o example_linear_model.o fil.o kmeans.o knn.o lm_predict.o ols.o pca.o qn.o random_forest_classifier.o random_forest_regressor.o random_projection.o ridge.o sgd.o svm_classifier.o svm_regressor.o tsne.o tsvd.o umap.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpp940U7/R.INSTALL1f69aa4cf7b885/cuda.ml/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cuda.ml/00new/cuda.ml/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘cuda.ml’
finding HTML links ... done
cuML_major_version html
cuML_minor_version html
cuda.ml html
cuda_ml_agglomerative_clustering html
cuda_ml_can_predict_class_probabilities
html
cuda_ml_dbscan html
cuda_ml_elastic_net html
cuda_ml_fil_enabled html
cuda_ml_fil_load_model html
cuda_ml_inverse_transform html
cuda_ml_is_classifier html
cuda_ml_kmeans html
cuda_ml_knn html
cuda_ml_knn_algo_ivfflat html
cuda_ml_knn_algo_ivfpq html
cuda_ml_knn_algo_ivfsq html
cuda_ml_lasso html
cuda_ml_logistic_reg html
cuda_ml_ols html
cuda_ml_pca html
cuda_ml_rand_forest html
cuda_ml_rand_proj html
cuda_ml_ridge html
cuda_ml_serialize html
cuda_ml_sgd html
cuda_ml_svm html
cuda_ml_transform html
cuda_ml_tsne html
cuda_ml_tsvd html
cuda_ml_umap html
cuda_ml_unserialize html
has_cuML html
predict.cuda_ml_fil html
predict.cuda_ml_knn html
predict.cuda_ml_linear_model html
predict.cuda_ml_logistic_reg html
predict.cuda_ml_rand_forest html
predict.cuda_ml_svm html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cuda.ml)