* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘ctsemOMX’ ... ** this is package ‘ctsemOMX’ version ‘1.0.6’ ** package ‘ctsemOMX’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘ctsemOMX’ finding HTML links ... done AnomAuth html Oscillating html ctCI html ctCompareExpected html ctExample1 html ctExample1TIpred html ctExample2 html ctExample2level html ctExample3 html ctExample4 html ctFit html Rd warning: ctFit.Rd:125: missing link ‘ctModel’ Rd warning: ctFit.Rd:36: missing link ‘ctModel’ Rd warning: ctFit.Rd:134: missing link ‘ctModel’ ctGenerateFromFit html ctIndplot html ctModelFromFit html Rd warning: ctModelFromFit.Rd:13: missing link ‘ctModel’ ctMultigroupFit html Rd warning: ctMultigroupFit.Rd:22: missing link ‘ctLongToWide’ Rd warning: ctMultigroupFit.Rd:29: missing link ‘ctModel’ Rd warning: ctMultigroupFit.Rd:102: missing link ‘ctModel’ ctPlot html ctPostPredict html Rd warning: ctPostPredict.Rd:31: missing link ‘ctPlotArray’ ctRefineTo html Rd warning: ctRefineTo.Rd:12: missing link ‘ctModel’ ctsemOMX html Rd warning: ctsemOMX.Rd:20: missing link ‘ctModel’ Rd warning: ctsemOMX.Rd:28: missing link ‘ctModel’ datastructure html longexample html plot.ctsemFit html plot.ctsemMultigroupFit html summary.ctsemFit html Rd warning: summary.ctsemFit.Rd:34: missing link ‘ctModel’ summary.ctsemMultigroupFit html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ctsemOMX)