* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cstab’ ...
** package ‘cstab’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-13) 13.2.0’
make[1]: Entering directory '/tmp/Rtmp8sVOrx/R.INSTALL216d9339ee2dee/cstab/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c distMat.cpp -o distMat.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c instabCorrection.cpp -o instabCorrection.o
instabCorrection.cpp: In function ‘double rootCombLookup(std::vector<double>, std::vector<double>)’:
instabCorrection.cpp:57:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   57 |   for(i = 0; i < ns.size(); i++) n += ns[i];
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:58:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   58 |   for(i = 0; i < ns.size(); i++){
      |              ~~^~~~~~~~~~~
instabCorrection.cpp: In function ‘double stabExp(std::vector<double>, std::vector<double>)’:
instabCorrection.cpp:72:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   72 |   for(i = 0; i < ns.size(); i++) n += ns[i];
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:73:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   73 |   for(i = 0; i < ns.size(); i++){
      |              ~~^~~~~~~~~~~
instabCorrection.cpp:76:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
   76 |       for(int j = 0; j < ns.size(); j++) {
      |                      ~~^~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native  -c kmeansPredict.cpp -o kmeansPredict.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cstab.so RcppExports.o distMat.o instabCorrection.o kmeansPredict.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp8sVOrx/R.INSTALL216d9339ee2dee/cstab/src'
make[1]: Entering directory '/tmp/Rtmp8sVOrx/R.INSTALL216d9339ee2dee/cstab/src'
make[1]: Leaving directory '/tmp/Rtmp8sVOrx/R.INSTALL216d9339ee2dee/cstab/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cstab/00new/cstab/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘cstab’
    finding HTML links ... done
    cDistance                               html  
    cStability                              html  
    cluster_example                         html  
    cstab                                   html  
    lookup                                  html  
    plot.cstab                              html  
    print.cstab                             html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cstab)