* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘crosstalkr’ ...
** this is package ‘crosstalkr’ version ‘1.0.5’
** package ‘crosstalkr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8MDIyC/R.INSTALL1e9fff2822a359/crosstalkr/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c calc_np.cpp -o calc_np.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o crosstalkr.so RcppExports.o calc_np.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8MDIyC/R.INSTALL1e9fff2822a359/crosstalkr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8MDIyC/R.INSTALL1e9fff2822a359/crosstalkr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8MDIyC/R.INSTALL1e9fff2822a359/crosstalkr/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-crosstalkr/00new/crosstalkr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘crosstalkr’
    finding HTML links ... done
    add_expression                          html  
    add_value                               html  
    as_gene_symbol                          html  
    bootstrap_null                          html  
    calc_dnp_i                              html  
    calc_np                                 html  
    calc_np_all                             html  
    calc_np_all_legacy                      html  
    calc_np_i                               html  
    check_crosstalk                         html  
    combine_null                            html  
    compute_crosstalk                       html  
    compute_dnp                             html  
    compute_np                              html  
    compute_null_dnp                        html  
    crosstalk_subgraph                      html  
    crosstalkr                              html  
    detect_inputtype                        html  
    dist_calc                               html  
    ensembl_type                            html  
    experiment_breakout                     html  
    fcalc_np_all                            html  
    final_combine                           html  
    final_dist_calc                         html  
    get_neighbors                           html  
    get_random_graph                        html  
    get_topn                                html  
    gfilter                                 html  
    gfilter.ct                              html  
    gfilter.igraph_method                   html  
    gfilter.np                              html  
    gfilter.value                           html  
    is_ensembl                              html  
    is_entrez                               html  
    load_ppi                                html  
    match_seeds                             html  
    node_repression                         html  
    norm_colsum                             html  
    plot_ct                                 html  
    ppi_intersection                        html  
    ppi_union                               html  
    prep_biogrid                            html  
    prep_stringdb                           html  
    sparseRWR                               html  
    supported_species                       html  
    tidy_expression                         html  
    to_taxon_id                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (crosstalkr)