* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cpam’ ...
** this is package ‘cpam’ version ‘0.1.3’
** package ‘cpam’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘cpam’
    finding HTML links ... done
    compute_normalization_factors           html  
    compute_p_values                        html  
    convert_to_long_format                  html  
    cpam-class                              html  
    cpam-package                            html  
    estimate_changepoint                    html  
    estimate_dispersions_wrapper            html  
    handle_gene_aggregation                 html  
    import_count_data                       html  
    ose_rule                                html  
    pipe                                    html  
    plot_cluster                            html  
    plot_cpam                               html  
    prepare_cpam                            html  
    process_bootstrap_data                  html  
    process_count_matrix                    html  
    results                                 html  
    select_shape                            html  
    simulate_p_mvn                          html  
    summarise_bootstraps                    html  
    ts_filter                               html  
    validate_cores                          html  
    validate_inputs                         html  
    visualise                               html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cpam)