* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘corncob’ ...
** this is package ‘corncob’ version ‘0.4.2’
** package ‘corncob’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘corncob’
    finding HTML links ... done
    HDIbetabinom                            html  
    bbdml                                   html  
    checkNested                             html  
    clean_taxa_names                        html  
    contrastsTest                           html  
    convert_phylo                           html  
    corncob-package                         html  
    coth                                    html  
    dbetabin                                html  
    dbetabin_neg                            html  
    dbetabinom_cts                          html  
    differentialTest                        html  
    doBoot                                  html  
    fishZ                                   html  
    genInits                                html  
    getRestrictionTerms                     html  
    gr_full                                 html  
    hessian                                 html  
    ibd_phylo_otu                           html  
    ibd_phylo_sample                        html  
    ibd_phylo_taxa                          html  
    invfishZ                                html  
    invlogit                                html  
    logit                                   html  
    lrtest                                  html  
    objfun                                  html  
    otu_to_taxonomy                         html  
    pbLRT                                   html  
    pbRao                                   html  
    pbWald                                  html  
    pipe                                    html  
    plot.bbdml                              html  
    plot.differentialTest                   html  
    print.bbdml                             html  
    print.differentialTest                  html  
    print.summary.bbdml                     html  
    qbetabinom                              html  
    raotest                                 html  
    sandSE                                  html  
    sand_vcov                               html  
    score                                   html  
    simulate.bbdml                          html  
    soil_phylo_otu                          html  
    soil_phylo_sample                       html  
    soil_phylo_taxa                         html  
    soil_phylum_contrasts_otu               html  
    soil_phylum_contrasts_sample            html  
    soil_phylum_small_otu                   html  
    soil_phylum_small_otu1                  html  
    soil_phylum_small_sample                html  
    summary.bbdml                           html  
    waldchisq                               html  
    waldchisq_test                          html  
    waldt                                   html  
    warn_phyloseq                           html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (corncob)