* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘clustAnalytics’ ...
** package ‘clustAnalytics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpuNJr7E/R.INSTALLe848516844977/clustAnalytics/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c TPR.cpp -o TPR.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c count_contingency_tables_new.cpp -o count_contingency_tables_new.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c graph.cpp -o graph.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mutual_information.cpp -o mutual_information.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c resampled_edgelist.cpp -o resampled_edgelist.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rewire.cpp -o rewire.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c scoring_functions.cpp -o scoring_functions.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ssmatrix.cpp -o ssmatrix.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c transitivity.cpp -o transitivity.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o clustAnalytics.so RcppExports.o TPR.o count_contingency_tables_new.o graph.o mutual_information.o resampled_edgelist.o rewire.o scoring_functions.o ssmatrix.o transitivity.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpuNJr7E/R.INSTALLe848516844977/clustAnalytics/src'
make[1]: Entering directory '/tmp/RtmpuNJr7E/R.INSTALLe848516844977/clustAnalytics/src'
make[1]: Leaving directory '/tmp/RtmpuNJr7E/R.INSTALLe848516844977/clustAnalytics/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-clustAnalytics/00new/clustAnalytics/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘clustAnalytics’
    finding HTML links ... done
    FOMD                                    html  
    H_fractions_rows                        html  
    apply_subgraphs                         html  
    auxiliary_functions                     html  
    average_degree                          html  
    average_odf                             html  
    barabasi_albert_blocks                  html  
    boot_alg_list                           html  
    c_rs_table                              html  
    clustAnalytics-package                  html  
    conductance                             html  
    contingency_to_membership_vectors       html  
    count_contingency_tables_log            html  
    coverage                                html  
    cut_ratio                               html  
    density_ratio                           html  
    edges_inside                            html  
    estimate_H_fraction_r_rows              html  
    estimate_H_fractions                    html  
    evaluate_significance                   html  
    evaluate_significance_r                 html  
    expansion                               html  
    g_forex                                 html  
    igraph_to_edgelist                      html  
    internal_density                        html  
    log_omega_estimation                    html  
    make_graph_weighted                     html  
    max_odf                                 html  
    normalized_cut                          html  
    out_degree_fractions                    html  
    reduced_mutual_information              html  
    relabel                                 html  
    rewireCpp                               html  
    scoring_functions                       html  
    sort_matrix                             html  
    triangle_participation_ratio_communities
                                            html  
    walk_step                               html  
    weighted_clustering_coefficient         html  
    weighted_transitivity                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (clustAnalytics)