* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘clmstan’ ... ** this is package ‘clmstan’ version ‘0.1.1’ ** package ‘clmstan’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpc7m68S/R.INSTALL197ebe4532e806/clmstan/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpc7m68S/R.INSTALL197ebe4532e806/clmstan/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpc7m68S/R.INSTALL197ebe4532e806/clmstan/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpc7m68S/R.INSTALL197ebe4532e806/clmstan/src' installing via 'install.libs.R' to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-clmstan/00new/clmstan Note: Stan models were not compiled because 'cmdstanr' is not installed. Models will be compiled on first use if CmdStan is available. See for details. ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘clmstan’ finding HTML links ... done aep_cdf html apply_custom_link_priors html apply_priors_to_stan_data html aranda_ordaz_cdf html c.clm_prior_spec html cauchy html clm_cdf html clm_prior html clm_stan html clmstan-class html clmstan-package html cloglog_cdf html coef.clmstan html compute_probs_all html compute_probs_single html compute_r_eff html convert_prior_spec_to_legacy html diagnostics html extract_acf html extract_link_param_draws html extract_link_params_summary html extract_log_lik html extract_posterior_summary html extract_prediction_draws html extract_y_rep html fitted.clmstan html flat html format_dist html gamma html get_base_link_params html get_clmstan_draws html get_coef_names html get_default_link_prior html get_default_priors html get_default_threshold_prior html get_link_param_for_draw html get_link_params html get_link_type html get_model_name html get_sp_base_type html get_threshold_names html get_threshold_params html gev_cdf html is.clmstan html is_flexible_link html link_functions html loggamma_cdf html loglog_cdf html loo.clmstan html make_design_matrix html map_class_to_params html needs_full_model html new_clmstan html normal html parse_clm_formula html plot.clmstan html posterior_predict.clmstan html predict.clmstan html prepare_link_params html prepare_link_params_full html prepare_prediction_matrix html prepare_stan_data html prepare_stan_data_dispatch html prepare_stan_data_equidistant html prepare_stan_data_full html prepare_stan_data_symmetric html print.clm_dist html print.clm_prior html print.clm_prior_list html print.clm_prior_spec html print.clmstan html print.summary.clmstan html prior html sp_cdf html student_t html summarize_class_draws html summarize_probs_draws html summary.clmstan html supported_links html supported_thresholds html validate_full_params html validate_link html validate_link_params html validate_prediction_input html validate_prior html validate_prior_class_dist html validate_prior_values html validate_threshold html waic.clmstan html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clmstan)