* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘climatehealth’ ... ** this is package ‘climatehealth’ version ‘1.0.1’ ** package ‘climatehealth’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘climatehealth’ finding HTML links ... done abort_climate html abort_column_not_found html abort_model_error html abort_validation html aggregate_air_pollution_by_month html aggregate_air_pollution_by_region html aggregate_air_pollution_by_year html aggregate_by_column html air_pollution_descriptive_stats html air_pollution_do_analysis html air_pollution_meta_analysis html air_pollution_power_list html an_attrdl html analyze_air_pollution_daily html attrdl html attribution_calculation html calculate_air_pollution_grid_dims html calculate_daily_AF_AN html calculate_qaic html calculate_wildfire_rr_by_region html casecrossover_quasipoisson html check_and_write_vif html check_diseases_vif html check_empty_dataframe html check_file_exists html check_file_extension html check_has_rtools html check_wildfire_vif html climatehealth-package html combine_health_climate_data html common_descriptive_stats html common_descriptive_stats_api html common_descriptive_stats_core html contour_plot html create_air_pollution_lags html create_column_summaries html create_correlation_matrix html create_grid html create_inla_indices html create_lagged_variables html create_na_summary html create_temperature_splines html deprecate_descriptive_stats html descriptive_stats html descriptive_stats_core html detect_outliers html diarrhea_do_analysis html dlnm_meta_analysis html dlnm_min_mortality_temp html dlnm_pop_totals html dlnm_power_list html dlnm_predict_nat html dlnm_reduce_cumulative html dlnm_vif html dot-english_dow_names html dot-english_month_names html dot-with_english_locale html enforce_file_extension html extract_error_metadata html extract_means_for_geography html fit_air_pollution_gam html fwald html generate_descriptive_stats_run_id html generate_rr_pm_by_region html generate_rr_pm_overall html get_alpha_colour html get_lags_and_means html get_predictions html hc_add_national_data html hc_adf html hc_attr html hc_attr_tables html hc_create_crossbasis html hc_model_combo_res html hc_model_validation html hc_plot_af_cold_monthly html hc_plot_af_cold_yearly html hc_plot_af_heat_monthly html hc_plot_af_heat_yearly html hc_plot_ar_cold_monthly html hc_plot_ar_cold_yearly html hc_plot_ar_heat_monthly html hc_plot_ar_heat_yearly html hc_plot_attr_cold_totals html hc_plot_attr_heat_totals html hc_plot_power html hc_plot_rr html hc_predict_subnat html hc_quasipoisson_dlnm html hc_read_data html hc_rr_results html hc_save_results html install_INLA html install_terra html is_climate_error html join_ar_and_pm_monthly html join_health_and_climate_data html label_with_unit html load_air_pollution_data html load_and_process_climatedata html load_and_process_data html load_and_process_map html load_wildfire_data html malaria_do_analysis html mh_add_national_data html mh_attr html mh_attr_tables html mh_casecrossover_dlnm html mh_create_crossbasis html mh_model_combo_res html mh_model_validation html mh_plot_af_monthly html mh_plot_af_yearly html mh_plot_ar_monthly html mh_plot_ar_yearly html mh_plot_attr_totals html mh_plot_power html mh_plot_rr html mh_predict_reg html mh_read_and_format_data html mh_rr_results html mh_save_results html plot_RR html plot_RR_core html plot_aggregated_AF html plot_aggregated_AF_core html plot_air_pollution_an_ar_by_region html plot_air_pollution_an_ar_by_year html plot_air_pollution_an_ar_monthly html plot_air_pollution_exposure_response html plot_air_pollution_forest_by_lag html plot_air_pollution_forest_by_region html plot_air_pollution_monthly_histograms html plot_air_pollution_power html plot_an_by_region html plot_ar_by_region html plot_ar_pm_monthly html plot_attribution_metric html plot_avg_monthly html plot_boxplots html plot_correlation_matrix html plot_distributions html plot_health_climate_timeseries html plot_monthly_random_effects html plot_moving_average html plot_rate_overall html plot_regional_trends html plot_relative_risk html plot_rr_by_pm html plot_rr_by_pm_core html plot_rr_map html plot_scatter_grid html plot_seasonal_trends html plot_total_variables_by_year html plot_yearly_spatial_random_effect html prepare_descriptive_input html prepare_descriptive_output_dir html raise_if_null html read_and_format_data html read_input_data html reformat_data html run_descriptive_stats html run_descriptive_stats_api html run_inla_models html save_air_pollution_plot html save_wildfire_results html set_cross_basis html suggest_column_match html suicides_heat_do_analysis html summarise_AF_AN html temp_mortality_do_analysis html time_stratify html validate_case_type html validate_descriptive_columns html wildfire_do_analysis html with_pdf_device html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (climatehealth)