* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘circlize’ ...
** this is package ‘circlize’ version ‘0.4.16’
** package ‘circlize’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘circlize’
    finding HTML links ... done
    CELL_META                               html  
    Subset.CELL_META                        html  
    add_transparency                        html  
    adjacencyList2Matrix                    html  
    adjacencyMatrix2List                    html  
    arrange_links_evenly                    html  
    calc_gap                                html  
    chordDiagram                            html  
    chordDiagramFromDataFrame               html  
    chordDiagramFromMatrix                  html  
    circlize-package                        html  
    circlize                                html  
    circos.arrow                            html  
    circos.axis                             html  
    circos.barplot                          html  
    circos.boxplot                          html  
    circos.clear                            html  
    circos.connect                          html  
    circos.dendrogram                       html  
    circos.genomicAxis                      html  
    circos.genomicDensity                   html  
    circos.genomicHeatmap                   html  
    circos.genomicIdeogram                  html  
    circos.genomicInitialize                html  
    circos.genomicLabels                    html  
    circos.genomicLines                     html  
    circos.genomicLink                      html  
    circos.genomicPoints                    html  
    circos.genomicPosTransformLines         html  
    circos.genomicRainfall                  html  
    circos.genomicRect                      html  
    circos.genomicText                      html  
    circos.genomicTrack                     html  
    circos.genomicTrackPlotRegion           html  
    circos.heatmap                          html  
    circos.heatmap.initialize               html  
    circos.heatmap.link                     html  
    circos.info                             html  
    circos.initialize                       html  
    circos.initializeCircularGenome         html  
    circos.initializeWithIdeogram           html  
    circos.labels                           html  
    circos.lines                            html  
    circos.link                             html  
    circos.nested                           html  
    circos.par                              html  
    circos.points                           html  
    circos.polygon                          html  
    circos.raster                           html  
    circos.rect                             html  
    circos.segments                         html  
    circos.text                             html  
    circos.track                            html  
    circos.trackHist                        html  
    circos.trackLines                       html  
    circos.trackPlotRegion                  html  
    circos.trackPoints                      html  
    circos.trackText                        html  
    circos.triangle                         html  
    circos.update                           html  
    circos.updatePlotRegion                 html  
    circos.violin                           html  
    circos.xaxis                            html  
    circos.yaxis                            html  
    cm_h                                    html  
    cm_x                                    html  
    cm_y                                    html  
    col2value                               html  
    colorRamp2                              html  
    convert_height                          html  
    convert_length                          html  
    convert_x                               html  
    convert_y                               html  
    cytoband.col                            html  
    degree                                  html  
    draw.sector                             html  
    fontsize                                html  
    generateRandomBed                       html  
    genomicDensity                          html  
    get.all.sector.index                    html  
    get.all.track.index                     html  
    get.cell.meta.data                      html  
    get.current.chromosome                  html  
    get.current.sector.index                html  
    get.current.track.index                 html  
    getI                                    html  
    get_most_inside_radius                  html  
    highlight.chromosome                    html  
    highlight.sector                        html  
    inch_h                                  html  
    inch_x                                  html  
    inch_y                                  html  
    inches_h                                html  
    inches_x                                html  
    inches_y                                html  
    mm_h                                    html  
    mm_x                                    html  
    mm_y                                    html  
    names.CELL_META                         html  
    posTransform.default                    html  
    posTransform.text                       html  
    print.CELL_META                         html  
    rainfallTransform                       html  
    rand_color                              html  
    read.chromInfo                          html  
    read.cytoband                           html  
    reverse.circlize                        html  
    set.current.cell                        html  
    set_track_gap                           html  
    show.index                              html  
    smartAlign                              html  
    uh                                      html  
    ux                                      html  
    uy                                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (circlize)