* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘chillR’ ...
** package ‘chillR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpbNPymu/R.INSTALL126c215cbca658/chillR/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c PhenoFlex.cpp -o PhenoFlex.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o chillR.so PhenoFlex.o RcppExports.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpbNPymu/R.INSTALL126c215cbca658/chillR/src'
make[1]: Entering directory '/tmp/RtmpbNPymu/R.INSTALL126c215cbca658/chillR/src'
make[1]: Leaving directory '/tmp/RtmpbNPymu/R.INSTALL126c215cbca658/chillR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-chillR/00new/chillR/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘chillR’
finding HTML links ... done
Chilling_Hours html
ChuineCF html
ChuineFstar html
Date2YEARMODA html
DynModel_driver html
Dynamic_Model html
Empirical_daily_temperature_curve html
Empirical_hourly_temperatures html
GDD html
GDH html
GDH_model html
JDay_count html
JDay_earlier html
JDay_later html
KA_bloom html
KA_weather html
PLS_chill_force html
PLS_pheno html
PhenoFlex html
PhenoFlex_GAUSSwrapper html
PhenoFlex_GDHwrapper html
PhenoFlex_fixedDynModelGAUSSwrapper html
PhenoFlex_fixedDynModelwrapper html
RMSEP html
RPD html
RPIQ html
StepChill_Wrapper html
UniChill_Wrapper html
UniForce_Wrapper html
UnifiedModel_Wrapper html
Utah_Model html
VIP html
Winters_hours_gaps html
YEARMODA2Date html
add_date html
bloom_prediction html
bloom_prediction2 html
bloom_prediction3 html
bootstrap.phenologyFit html
c.bootstrap_phenologyFit html
california_stations html
check_temperature_record html
check_temperature_scenario html
chifull html
chile_agromet2chillR html
chillR-package html
finding level-2 HTML links ... done
chilling html
chilling_hourtable html
color_bar_maker html
convert_scen_information html
daily_chill html
daylength html
download_baseline_cmip6_ecmwfr html
download_cmip6_ecmwfr html
extract_cmip6_data html
extract_differences_between_characters
html
extract_temperatures_from_grids html
filter_temperatures html
fix_weather html
genSeason html
genSeasonList html
gen_rel_change_scenario html
getClimateWizardData html
getClimateWizard_scenarios html
get_last_date html
get_weather html
handle_cimis html
handle_dwd html
handle_dwd_old html
handle_gsod html
handle_gsod_old html
handle_ucipm html
identify_common_string html
interpolate_gaps html
interpolate_gaps_hourly html
leap_year html
load_ClimateWizard_scenarios html
load_temperature_scenarios html
make_JDay html
make_all_day_table html
make_california_UCIPM_station_list html
make_chill_plot html
make_climate_scenario html
make_climate_scenario_from_files html
make_daily_chill_figures html
make_daily_chill_plot html
make_daily_chill_plot2 html
make_hourly_temps html
make_multi_pheno_trend_plot html
make_pheno_trend_plot html
ordered_climate_list html
patch_daily_temperatures html
patch_daily_temps html
phenologyFit html
phenologyFitter html
plot.bootstrap_phenologyFit html
plot.phenologyFit html
plot_PLS html
plot_climateWizard_scenarios html
plot_climate_scenarios html
plot_phenology_trends html
plot_scenarios html
predict.bootstrap_phenologyFit html
predict.phenologyFit html
print.phenologyFit html
read_tab html
runn_mean html
runn_mean_pred html
save_temperature_scenarios html
select_by_file_extension html
stack_hourly_temps html
stage_transitions html
step_model html
summary.bootstrap_phenologyFit html
summary.phenologyFit html
tempResponse html
tempResponse_daily_list html
tempResponse_hourtable html
temperature_generation html
temperature_scenario_baseline_adjustment
html
temperature_scenario_from_records html
test_if_equal html
weather2chillR html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (chillR)