* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘chicane’ ...
** package ‘chicane’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘chicane’
finding HTML links ... done
add.covariates html
add.fragment.coordinates html
bedtools.installed html
bre80 html
check.model.numerical.fit html
check.split.data.numerical.fit html
chicane html
combine.replicates html
compare.replicates html
convert.bam html
convert.hicup.digest.bed html
convert.standard.format html
convert.to.one.based html
create.locus.plot html
create.modelfit.plot html
distance.bin html
distance.split html
fill.in.zeros html
filter.fragments html
fit.glm html
fit.model html
get.combination.count html
get.components html
get.distance html
get.id.components html
get.interaction.id html
get.trans.counts html
is.glm.nb.maxiter.warning html
is.glm.nb.theta.error html
is.glm.nb.theta.warning html
model.rows.sanity.check html
model.try.catch html
multiple.testing.correct html
prepare.data html
read.bed html
run.model.fitting html
smart.split html
stratified.enrichment.sample html
test.enrichment html
verify.interaction.data html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (chicane)