* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘changepoint’ ...
** package ‘changepoint’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpFGHLlf/R.INSTALL390a223cb54f87/changepoint/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c BinSeg_one_func_minseglen.c -o BinSeg_one_func_minseglen.o
BinSeg_one_func_minseglen.c: In function ‘binseg’:
BinSeg_one_func_minseglen.c:98:19: warning: ‘costfunction’ may be used uninitialized [-Wmaybe-uninitialized]
98 | null = (-0.5)*costfunction(*(sumstat+end)-*(sumstat+st-1),*(sumstat + *n + 1 +end)-*(sumstat + *n + st),*(sumstat + *n + *n + 2 +end)-*(sumstat + *n + *n + 1 +st), end - st + 1, *shape);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
BinSeg_one_func_minseglen.c:49:12: note: ‘costfunction’ was declared here
49 | double (*costfunction)(double, double, double, int, double);
| ^~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c PELT_one_func_minseglen.c -o PELT_one_func_minseglen.o
PELT_one_func_minseglen.c: In function ‘PELTC’:
PELT_one_func_minseglen.c:159:25: warning: ‘costfunction’ may be used uninitialized [-Wmaybe-uninitialized]
159 | lastchangelike[j] = costfunction(*(sumstat+j),*(sumstat + *n + 1 + j),*(sumstat + *n + *n + 2 + j),j, *shape);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
PELT_one_func_minseglen.c:48:12: note: ‘costfunction’ was declared here
48 | double (*costfunction)(double, double, double, int, double);
| ^~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c changepoint_init.c -o changepoint_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cost_general_functions.c -o cost_general_functions.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o changepoint.so BinSeg_one_func_minseglen.o PELT_one_func_minseglen.o changepoint_init.o cost_general_functions.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpFGHLlf/R.INSTALL390a223cb54f87/changepoint/src'
make[1]: Entering directory '/tmp/RtmpFGHLlf/R.INSTALL390a223cb54f87/changepoint/src'
make[1]: Leaving directory '/tmp/RtmpFGHLlf/R.INSTALL390a223cb54f87/changepoint/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-changepoint/00new/changepoint/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘acf’ in package ‘changepoint’
** help
*** installing help indices
converting help for package ‘changepoint’
finding HTML links ... done
BINSEG html
HC1 html
Lai2005fig3 html
Lai2005fig4 html
PELT html
changepoint-package html
class_input html
coef-methods html
cpt-class html
cpt.mean html
cpt.meanvar html
cpt.range-class html
cpt.reg-class html
cpt.var html
cpts--methods html
cpts- html
cpts-methods html
cpts html
cpts.full--methods html
cpts.full- html
cpts.full-methods html
cpts.full html
cpts.ts-methods html
cpts.ts html
cpttype--methods html
cpttype- html
cpttype-methods html
cpttype html
data.set--methods html
data.set- html
data.set-methods html
data.set html
data.set.ts-methods html
data.set.ts html
decision html
distribution--methods html
distribution- html
distribution-methods html
distribution html
ftse100 html
likelihood-methods html
likelihood html
logLik-methods html
method--methods html
method- html
method-methods html
method html
minseglen--methods html
minseglen- html
minseglen-methods html
minseglen html
ncpts-methods html
ncpts html
ncpts.max--methods html
ncpts.max- html
ncpts.max-methods html
ncpts.max html
nseg-methods html
nseg html
param-methods html
param html
param.est--methods html
param.est- html
param.est-methods html
param.est html
pen.type--methods html
pen.type- html
pen.type-methods html
pen.type html
pen.value--methods html
pen.value- html
pen.value-methods html
pen.value html
pen.value.full--methods html
pen.value.full- html
pen.value.full-methods html
pen.value.full html
penalty_decision html
plot-methods html
seg.len-methods html
seg.len html
show-methods html
summary-methods html
test.stat--methods html
test.stat- html
test.stat-methods html
test.stat html
wave.c44137 html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (changepoint)