* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cglasso’ ...
** package ‘cglasso’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpHkTn0H/R.INSTALLa96bd403111d7/cglasso/src'
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c Find_ConnectedComp.f90 -o Find_ConnectedComp.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c FortranR_interface.c -o FortranR_interface.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cggm_v1.f90 -o cggm_v1.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cggm_v2.f90 -o cggm_v2.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cglasso_v1.f90 -o cglasso_v1.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cglasso_v1_trace.c -o cglasso_v1_trace.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c cglasso_v2.f90 -o cglasso_v2.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cglasso_v2_trace.c -o cglasso_v2_trace.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c dfs.f90 -o dfs.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c e_step_v2.f90 -o e_step_v2.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c fitmcgm.f90 -o fitmcgm.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c glasso_bcd.f90 -o glasso_bcd.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glasso_trace.c -o glasso_trace.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c glassosub.f90 -o glassosub.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c impute.f90 -o impute.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c inv.f90 -o inv.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c lasso.f90 -o lasso.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c lasso_h.f90 -o lasso_h.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c multilasso.f90 -o multilasso.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c predict.f90 -o predict.o
gfortran-13 -fpic -g -O2 -Wall -mtune=native -c setup.f90 -o setup.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cglasso.so Find_ConnectedComp.o FortranR_interface.o cggm_v1.o cggm_v2.o cglasso_v1.o cglasso_v1_trace.o cglasso_v2.o cglasso_v2_trace.o dfs.o e_step_v2.o fitmcgm.o glasso_bcd.o glasso_trace.o glassosub.o impute.o init.o inv.o lasso.o lasso_h.o multilasso.o predict.o setup.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpHkTn0H/R.INSTALLa96bd403111d7/cglasso/src'
make[1]: Entering directory '/tmp/RtmpHkTn0H/R.INSTALLa96bd403111d7/cglasso/src'
make[1]: Leaving directory '/tmp/RtmpHkTn0H/R.INSTALLa96bd403111d7/cglasso/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cglasso/00new/cglasso/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘cglasso’
finding HTML links ... done
AIC.cglasso html
BIC.cglasso html
ColMeans html
Example html
MKMEP html
MM html
QFun html
ShowStructure html
cggm html
cglasso-internal html
cglasso-package html
cglasso html
coef.cglasso html
datacggm html
dim.datacggm html
dimnames.datacggm html
event html
fitted.cglasso html
getGraph html
getMatrix html
hist.datacggm html
impute html
is.cglasso2igraph html
is.datacggm html
lower html
nobs.datacggm html
plot.GoF html
plot.cggm html
plot.cglasso html
plot.cglasso2igraph html
predict.cglasso html
qqcnorm html
rcggm html
residuals.cglasso html
rowNames html
select.cglasso html
summary.cglasso html
summary.datacggm html
to_graph html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cglasso)