* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cdlsim’ ...
** this is package ‘cdlsim’ version ‘0.1.0’
** package ‘cdlsim’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-15 (Debian 15.2.0-17) 15.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5drmKi/R.INSTALL2a57b7dad63b0/cdlsim/src'
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-15 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c transition_function.cpp -o transition_function.o
transition_function.cpp: In function ‘Rcpp::IntegerVector transition_patches(Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::List, int)’:
transition_function.cpp:143:7: warning: unused variable ‘row_index’ [-Wunused-variable]
  143 |   int row_index = -1;
      |       ^~~~~~~~~
transition_function.cpp:144:7: warning: unused variable ‘new_value_index’ [-Wunused-variable]
  144 |   int new_value_index = 0;
      |       ^~~~~~~~~~~~~~~
g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cdlsim.so RcppExports.o transition_function.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5drmKi/R.INSTALL2a57b7dad63b0/cdlsim/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5drmKi/R.INSTALL2a57b7dad63b0/cdlsim/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5drmKi/R.INSTALL2a57b7dad63b0/cdlsim/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cdlsim/00new/cdlsim/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘cdlsim’
    finding HTML links ... done
    collapse_and_combined                   html  
    download_cdl_mat_files                  html  
    find_patches                            html  
    generate_transition_vectors             html  
    get_mat_data                            html  
    get_mat_data_dep                        html  
    get_trans_mat                           html  
    get_trans_mat_dep                       html  
    modify_matrix                           html  
    simulate_raster_patch                   html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cdlsim)