* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘bpnreg’ ...
** package ‘bpnreg’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpXqbUo2/R.INSTALL1558e451b12f5a/bpnreg/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c me.cpp -o me.o
me.cpp: In function ‘Rcpp::List pnme(Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, int, int, int, int)’:
me.cpp:320:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
320 | for (int j = 0; j < R_temp.n_elem; ++j){
| ~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c regression.cpp -o regression.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/BH/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o bpnreg.so RcppExports.o me.o regression.o utils.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpXqbUo2/R.INSTALL1558e451b12f5a/bpnreg/src'
make[1]: Entering directory '/tmp/RtmpXqbUo2/R.INSTALL1558e451b12f5a/bpnreg/src'
make[1]: Leaving directory '/tmp/RtmpXqbUo2/R.INSTALL1558e451b12f5a/bpnreg/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-bpnreg/00new/bpnreg/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘bpnreg’
finding HTML links ... done
BFc html
BFc.bpnme html
BFc.bpnr html
DIC_reg html
Dbd html
Maps html
Motor html
RHSForm-set html
RHSForm html
anyBars html
b_samp html
betaBlock html
bpnme html
bpnr html
bpnreg-package html
cat_check html
circ_coef html
circ_coef_rcpp html
coef_circ html
coef_circ.bpnme html
coef_circ.bpnr html
coef_lin html
coef_lin.bpnme html
coef_lin.bpnr html
coef_ran html
coef_ran.bpnme html
eigen_val html
eigen_vec html
expandDoubleVerts html
findbars html
fit html
fit.bpnme html
fit.bpnr html
hmode html
hmodeC html
hmodeci html
hmodeciC html
hpd_est html
hpd_est_circ html
isAnyArgBar html
isBar html
lik_me html
lik_reg html
mean_circ html
mmme html
mmr html
mode_est html
mode_est_circ html
mvrnorm_arma_eigen html
nobars html
nobars_ html
omega_samp html
pnme html
pnr html
print.bpnme html
print.bpnr html
reOnly html
rho html
rho_circ html
safeDeparse html
sd_circ html
slice_rcpp html
subbars html
summe html
sumr html
theta_bar html
traceplot html
traceplot.bpnme html
traceplot.bpnr html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bpnreg)