* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘bnstruct’ ...
** package ‘bnstruct’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpGXStV6/R.INSTALLcbf841d637282/bnstruct/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bnstruct_init.c -o bnstruct_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c impfast.c -o impfast.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mmhcfast.c -o mmhcfast.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c smfast.c -o smfast.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c util.c -o util.o
util.c: In function ‘score_node_1’:
util.c:52:10: warning: ‘score’ may be used uninitialized [-Wmaybe-uninitialized]
52 | return score;
| ^~~~~
util.c:35:10: note: ‘score’ was declared here
35 | double score;
| ^~~~~
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o bnstruct.so bnstruct_init.o impfast.o mmhcfast.o smfast.o util.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpGXStV6/R.INSTALLcbf841d637282/bnstruct/src'
make[1]: Entering directory '/tmp/RtmpGXStV6/R.INSTALLcbf841d637282/bnstruct/src'
make[1]: Leaving directory '/tmp/RtmpGXStV6/R.INSTALLcbf841d637282/bnstruct/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-bnstruct/00new/bnstruct/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘bnstruct’
finding HTML links ... done
BN-class html
BNDataset-class html
InferenceEngine-class html
add.observations-set html
asia html
asia_10000 html
asia_2_layers html
belief.propagation html
bn-method html
bn-set html
boot html
boots-set html
boots html
bootstrap html
build.junction.tree html
child html
child_NA_5000 html
complete html
cpts-set html
cpts html
dag-set html
dag html
dag.to.cpdag html
data.file-set html
data.file html
discreteness-set html
discreteness html
edge.dir.wpdag html
em html
get.most.probable.values html
has.boots html
has.imputed.boots html
has.imputed.data html
has.raw.data html
header.file-set html
header.file html
imp.boots-set html
imp.boots html
impute html
imputed.data-set html
imputed.data html
interventions-set html
interventions html
jpts-set html
jpts html
jt.cliques-set html
jt.cliques html
junction.tree-set html
junction.tree html
knn.impute html
layering html
learn.dynamic.network html
learn.network html
learn.params html
learn.structure html
marginals html
name-set html
name html
node.sizes-set html
node.sizes html
num.boots-set html
num.boots html
num.items-set html
num.items html
num.nodes-set html
num.nodes html
num.time.steps-set html
num.time.steps html
num.variables-set html
num.variables html
observations-set html
observations html
plot html
print html
quantiles-set html
quantiles html
raw.data-set html
raw.data html
read.bif html
read.dataset html
read.dsc html
read.net html
sample.dataset html
sample.row html
save.to.eps html
scoring.func-set html
scoring.func html
shd html
show html
struct.algo-set html
struct.algo html
test.updated.bn html
tune.knn.impute html
updated.bn-method html
updated.bn-set html
variables-set html
variables html
wpdag-set html
wpdag html
wpdag.from.dag html
write.dsc html
write_xgmml html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bnstruct)