* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘bayesDiagnostics’ ... ** this is package ‘bayesDiagnostics’ version ‘0.1.0’ ** package ‘bayesDiagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘bayesDiagnostics’ finding HTML links ... done automated_ppc html bayesDiagnostics html bayes_factor_comparison html bayesian_p_values html calculate_bayesian_pvalues html calculate_kl_divergence html calculate_kurtosis html calculate_overlap_coefficient html calculate_per_chain_ess html calculate_sensitivity_metrics html calculate_shrinkage html calculate_skewness html calculate_test_statistics html calculate_wasserstein_distance html check_parameter_convergence html collect_convergence_warnings html compute_robustness_index html compute_sensitivity_metric html convert_format html create_convergence_plots html create_elicitation_diagnostics html create_ess_plots html create_ppc_plots html create_robustness_plots html create_sensitivity_guidance html create_sensitivity_plots html detect_group_vars html diagnostic_report html effective_sample_size_diagnostics html elicit_continuous_prior html elicit_discrete_prior html elicit_proportion_prior html extract_all_parameters html extract_diagnostics html extract_ess_statistics html extract_from_brms html extract_from_cmdstan html extract_from_mcmc_list html extract_from_stanfit html extract_from_stanreg html extract_posterior html extract_posterior_summary html extract_posterior_unified html generate_ess_recommendations html generate_posterior_predictive_samples html generate_prior_alternatives html generate_prior_perturbations html generate_recommendations html generate_stronger_version html generate_weaker_version html graphical_ppc html hierarchical_convergence html identify_concerning_parameters html identify_group_params html identify_population_params html identify_problematic_ess html interpret_bayes_factor html mcmc_diagnostics_summary html model_comparison_suite html plot.bayes_factor_comparison html posterior_predictive_check html ppc_crossvalidation html predictive_performance html print.bayes_factor_comparison html prior_elicitation_helper html prior_robustness html prior_sensitivity html refit_with_prior html subset_draws html summarize_convergence html summarize_ess html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bayesDiagnostics)