* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘baseq’ ...
** this is package ‘baseq’ version ‘0.2.0’
** package ‘baseq’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘baseq’
finding HTML links ... done
as_Biostrings html
as_baseq_dna html
as_baseq_rna html
calculate_assembly_stats html
calculate_charge html
calculate_codon_usage html
calculate_identity html
calculate_mw html
calculate_pi html
calculate_tm html
clean_file html
clean_seq html
count_bases html
count_kmers html
count_pattern html
dna_to_protein html
dna_to_rna html
fastq_to_fasta html
filter_fastq_quality html
find_cpg_islands html
find_longest_orf html
gc_content html
get_genetic_code html
plot_aa_composition html
plot_dotplot html
plot_gc_skew html
plot_hydrophobicity html
read_seq html
rev_comp html
reverse_translate html
rna_to_dna html
rna_to_protein html
sars_fragment html
search_motif html
shuffle_sequence html
simulate_digestion html
simulate_fasta html
simulate_fastq html
simulate_pcr html
simulate_sequence html
summarize_fasta html
translate html
write_seq html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (baseq)