* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘automerge’ ...
** this is package ‘automerge’ version ‘0.5.0’
** package ‘automerge’ successfully unpacked and MD5 sums checked
** using staged installation
Checking for system automerge installation...
System automerge not found, building from bundled source...
Building automerge-c from bundled source...
using Rust package manager: 'cargo 1.95.0 (f2d3ce0bd 2026-03-21) (built from a source tarball)'
using Rust compiler: 'rustc 1.95.0 (59807616e 2026-04-14) (built from a source tarball)'
Extracting vendored Rust dependencies...
Building (this may take several minutes)...
warning: profiles for the non root package will be ignored, specify profiles at the workspace root:
package: /home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src/automerge/rust/hexane/Cargo.toml
workspace: /home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src/automerge/rust/Cargo.toml
Compiling proc-macro2 v1.0.106
Compiling quote v1.0.46
Compiling unicode-ident v1.0.24
Compiling libc v0.2.186
Compiling serde_core v1.0.228
Compiling syn v2.0.118
Compiling zmij v1.0.21
Compiling typenum v1.20.1
Compiling hybrid-array v0.4.13
Compiling winnow v1.0.3
Compiling serde v1.0.228
Compiling serde_json v1.0.150
Compiling cfg-if v1.0.4
Compiling toml_parser v1.1.2+spec-1.1.0
Compiling serde_derive v1.0.228
Compiling toml_datetime v0.7.5+spec-1.1.0
Compiling serde_spanned v1.1.1
Compiling hashbrown v0.17.1
Compiling thiserror v2.0.18
Compiling equivalent v1.0.2
Compiling memchr v2.8.2
Compiling remove_dir_all v0.5.3
Compiling winnow v0.7.15
Compiling fastrand v1.9.0
Compiling cbindgen v0.29.4
Compiling itoa v1.0.18
Compiling crc32fast v1.5.0
Compiling tempfile v3.3.0
Compiling toml v0.9.12+spec-1.1.0
Compiling indexmap v2.14.0
Compiling thiserror-impl v2.0.18
Compiling block-buffer v0.12.1
Compiling crypto-common v0.2.2
Compiling heck v0.5.0
Compiling once_cell v1.21.4
Compiling simd-adler32 v0.3.9
Compiling adler2 v2.0.1
Compiling getrandom v0.4.3
Compiling log v0.4.33
Compiling miniz_oxide v0.8.9
Compiling tracing-core v0.1.36
Compiling digest v0.11.3
Compiling tracing-attributes v0.1.31
Compiling cpufeatures v0.3.0
Compiling either v1.16.0
Compiling rand_core v0.10.1
Compiling tinyvec_macros v0.1.1
Compiling leb128 v0.2.7
Compiling pin-project-lite v0.2.17
Compiling tracing v0.1.44
Compiling hexane v0.2.1 (/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src/automerge/rust/hexane)
Compiling itertools v0.14.0
Compiling tinyvec v1.11.0
Compiling rand v0.10.1
Compiling sha2 v0.11.0
Compiling automerge-c v0.3.0 (/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src/automerge/rust/automerge-c)
Compiling flate2 v1.1.9
Compiling smol_str v0.2.2
Compiling hex v0.4.3
Compiling rustc-hash v2.1.2
Compiling unicode-segmentation v1.13.3
Compiling automerge v0.10.0 (/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src/automerge/rust/automerge)
warning: unused import: `to_expand_mark`
--> automerge-c/src/doc/mark.rs:32:16
|
32 | pub(crate) use to_expand_mark;
| ^^^^^^^^^^^^^^
|
= note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
warning: unused import: `to_sync_state`
--> automerge-c/src/sync/state.rs:18:16
|
18 | pub(crate) use to_sync_state;
| ^^^^^^^^^^^^^
warning: `automerge-c` (lib) generated 2 warnings (run `cargo fix --lib -p automerge-c` to apply 2 suggestions)
Finished `release` profile [optimized] target(s) in 3m 11s
Successfully built automerge-c from source
Configuration:
PKG_CFLAGS: -I../am-install/include
PKG_LIBS: ../am-install/lib/libautomerge.a -pthread -ldl -lm -lrt
** libs
using C compiler: ‘gcc-15 (Debian 15.3.0-1) 15.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src'
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c changes.c -o changes.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cursors.c -o cursors.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c document.c -o document.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c errors.c -o errors.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c memory.c -o memory.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c objects.c -o objects.o
gcc-15 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sync.c -o sync.o
gcc-15 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o automerge.so changes.o cursors.o document.o errors.o init.o memory.o objects.o sync.o ../am-install/lib/libautomerge.a -pthread -ldl -lm -lrt -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpygHCZy/R.INSTALL3276932d9d108/automerge/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-automerge/00new/automerge/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘automerge’
finding HTML links ... done
am_apply_changes html
am_change_actor_id html
am_change_deps html
am_change_from_bytes html
am_change_hash html
am_change_message html
am_change_seq html
am_change_size html
am_change_time html
am_change_to_bytes html
am_clone html
am_close html
am_commit html
am_commit_empty html
am_counter html
am_counter_increment html
am_create html
am_cursor html
am_cursor_equal html
am_cursor_from_bytes html
am_cursor_from_string html
am_cursor_position html
am_cursor_to_bytes html
am_cursor_to_string html
am_delete html
am_delete_path html
am_equal html
am_fork html
am_get html
am_get_actor html
am_get_actor_hex html
am_get_change_by_hash html
am_get_changes html
am_get_changes_added html
am_get_heads html
am_get_last_local_change html
am_get_missing_deps html
am_get_path html
am_insert html
am_items html
am_keys html
am_length html
am_list html
am_list_get_all html
am_list_range html
am_load html
am_load_changes html
am_load_incremental html
am_map html
am_map_get_all html
am_map_range html
am_mark html
am_mark_clear html
am_marks html
am_marks_at html
am_merge html
am_pending_ops html
am_put html
am_put_path html
am_rollback html
am_save html
am_save_incremental html
am_set_actor html
am_sync html
am_sync_decode html
am_sync_encode html
am_sync_state html
am_sync_state_decode html
am_sync_state_encode html
am_text html
am_text_content html
am_text_splice html
am_text_update html
am_uint64 html
am_values html
as.character.am_text html
as.list.am_doc html
as.list.am_list html
as.list.am_map html
as.list.am_text html
as_automerge html
automerge-constants html
automerge-package html
extract-am_doc html
extract-am_object html
from_automerge html
length.am_doc html
length.am_object html
names.am_doc html
names.am_map html
print.am_change html
print.am_counter html
print.am_cursor html
print.am_doc html
print.am_list html
print.am_map html
print.am_object html
print.am_syncstate html
print.am_text html
print.am_uint64 html
replace-am_doc html
replace-am_object html
str.am_doc html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (automerge)