* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ampir’ ...
** this is package ‘ampir’ version ‘1.1.0’
** package ‘ampir’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpuo2xEp/R.INSTALL92cdb4365b1c5/ampir/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c rcpp_paac.cpp -o rcpp_paac.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ampir.so RcppExports.o rcpp_paac.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpuo2xEp/R.INSTALL92cdb4365b1c5/ampir/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpuo2xEp/R.INSTALL92cdb4365b1c5/ampir/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpuo2xEp/R.INSTALL92cdb4365b1c5/ampir/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ampir/00new/ampir/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ampir’
    finding HTML links ... done
    aaseq_is_valid                          html  
    calc_amphiphilicity                     html  
    calc_hydrophobicity                     html  
    calc_mw                                 html  
    calc_net_charge                         html  
    calc_pI                                 html  
    calc_pseudo_comp                        html  
    calculate_features                      html  
    chunk_rows                              html  
    df_to_faa                               html  
    predict_amps                            html  
    read_faa                                html  
    remove_nonstandard_aa                   html  
    remove_stop_codon                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ampir)