* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘adaptiveGPCA’ ...
** this is package ‘adaptiveGPCA’ version ‘0.1.3’
** package ‘adaptiveGPCA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘adaptiveGPCA’
    finding HTML links ... done
    AntibioticPhyloseq                      html  
    AntibioticSmall                         html  
    adaptiveGPCA-package                    html  
    adaptivegpca                            html  
    check_axes                              html  
    check_phyloseq                          html  
    estimateComponents                      html  
    estimateComponents2                     html  
    findReflection                          html  
    gpca                                    html  
    gpcaEvecs                               html  
    gpcaFullFamily                          html  
    gradLik                                 html  
    gradSigma2OfR                           html  
    inspectTaxonomy                         html  
    likelihood                              html  
    likelihoodR                             html  
    likelihood_two_params                   html  
    normalizeMatrix                         html  
    plot.adaptivegpca                       html  
    print.adaptivegpca                      html  
    processPhyloseq                         html  
    sigma2OfR                               html  
    varianceOnEvecs                         html  
    visualizeFullFamily                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (adaptiveGPCA)