* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘TrialEmulation’ ...
** package ‘TrialEmulation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-24) 13.2.0’
make[1]: Entering directory '/tmp/RtmpcjJcoq/R.INSTALL38fdd62cf90ecc/TrialEmulation/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c code.cpp -o code.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o TrialEmulation.so RcppExports.o code.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpcjJcoq/R.INSTALL38fdd62cf90ecc/TrialEmulation/src'
make[1]: Entering directory '/tmp/RtmpcjJcoq/R.INSTALL38fdd62cf90ecc/TrialEmulation/src'
make[1]: Leaving directory '/tmp/RtmpcjJcoq/R.INSTALL38fdd62cf90ecc/TrialEmulation/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-TrialEmulation/00new/TrialEmulation/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘TrialEmulation’
    finding HTML links ... done
    TrialEmulation-package                  html  
    calculate_predictions                   html  
    case_control_sampling_trials            html  
    censor_func                             html  
    check_newdata                           html  
    data_manipulation                       html  
    data_preparation                        html  
    expand                                  html  
    expand_until_switch                     html  
    initiators                              html  
    predict.TE_msm                          html  
    print_TE                                html  
    robust_calculation                      html  
    select_data_cols                        html  
    summary_TE                              html  
    te_data_ex                              html  
    te_model_ex                             html  
    trial_example                           html  
    trial_msm                               html  
    vignette_switch_data                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘TrialEmulation’ as ‘TrialEmulation_0.0.3.8_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (TrialEmulation)