* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘TrialEmulation’ ...
** this is package ‘TrialEmulation’ version ‘0.0.4.5’
** package ‘TrialEmulation’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-8) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWZeEAx/R.INSTALL7ece8ff074d8/TrialEmulation/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c code.cpp -o code.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o TrialEmulation.so RcppExports.o code.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWZeEAx/R.INSTALL7ece8ff074d8/TrialEmulation/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWZeEAx/R.INSTALL7ece8ff074d8/TrialEmulation/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWZeEAx/R.INSTALL7ece8ff074d8/TrialEmulation/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-TrialEmulation/00new/TrialEmulation/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘TrialEmulation’
    finding HTML links ... done
    TrialEmulation-package                  html  
    calculate_predictions                   html  
    calculate_weights                       html  
    case_control_sampling_trials            html  
    censor_func                             html  
    check_newdata                           html  
    data_censored                           html  
    data_manipulation                       html  
    data_preparation                        html  
    expand                                  html  
    expand_trials                           html  
    expand_until_switch                     html  
    fit_msm                                 html  
    fit_outcome_model                       html  
    fit_weights_model                       html  
    initiators                              html  
    internal-methods                        html  
    ipw_data                                html  
    load_expanded_data                      html  
    outcome_data                            html  
    parsnip_model                           html  
    predict_marginal                        html  
    print_TE                                html  
    read_expanded_data                      html  
    robust_calculation                      html  
    sample_expanded_data                    html  
    save_expanded_data                      html  
    save_to_csv                             html  
    save_to_datatable                       html  
    save_to_duckdb                          html  
    select_data_cols                        html  
    set_censor_weight_model                 html  
    set_data                                html  
    set_expansion_options                   html  
    set_outcome_model                       html  
    set_switch_weight_model                 html  
    show_weight_models                      html  
    stats_glm_logit                         html  
    summary_TE                              html  
    te_data-class                           html  
    te_data_ex                              html  
    te_datastore-class                      html  
    te_datastore_csv-class                  html  
    te_datastore_duckdb-class               html  
    te_model_ex                             html  
    te_model_fitter-class                   html  
    te_outcome_data-class                   html  
    te_outcome_fitted-class                 html  
    te_outcome_model-class                  html  
    te_parsnip_model-class                  html  
    te_stats_glm_logit-class                html  
    trial_example                           html  
    trial_msm                               html  
    trial_sequence-class                    html  
    trial_sequence                          html  
    vignette_switch_data                    html  
    weight_model_data_indices               html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TrialEmulation)