* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘TraMineR’ ...
** package ‘TraMineR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpuC9emH/R.INSTALL826de317cb0e7/TraMineR/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DHDdistance.cpp -o DHDdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c LCPdistance.cpp -o LCPdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NMSDURSoftdistance.cpp -o NMSDURSoftdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NMSMSTSoftdistance.cpp -o NMSMSTSoftdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NMSMSTSoftdistanceII.cpp -o NMSMSTSoftdistanceII.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NMSMSTdistance.cpp -o NMSMSTdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NMSdistance.cpp -o NMSdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c OMPerdistance.cpp -o OMPerdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c OMVIdistance.cpp -o OMVIdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c OMdistance.cpp -o OMdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c OMvdistance.cpp -o OMvdistance.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TWEDdistance.cpp -o TWEDdistance.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c checktriangleineq.c -o checktriangleineq.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c chisq.cpp -o chisq.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c constraint.cpp -o constraint.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dist2matrix.c -o dist2matrix.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distancecalculator.cpp -o distancecalculator.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distancefunctions.cpp -o distancefunctions.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distanceobject.cpp -o distanceobject.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c eventdictionary.cpp -o eventdictionary.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c eventseq.cpp -o eventseq.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ffunctions.c -o ffunctions.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c inertiafunctions.c -o inertiafunctions.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c prefixtree.cpp -o prefixtree.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c seqedist.cpp -o seqedist.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tmrsequence.cpp -o tmrsequence.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c traminerdebug.cpp -o traminerdebug.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c treeeventmap.cpp -o treeeventmap.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c treeeventnode.cpp -o treeeventnode.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wcorr.c -o wcorr.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c weightedinertia.cpp -o weightedinertia.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o TraMineR.so DHDdistance.o LCPdistance.o NMSDURSoftdistance.o NMSMSTSoftdistance.o NMSMSTSoftdistanceII.o NMSMSTdistance.o NMSdistance.o OMPerdistance.o OMVIdistance.o OMdistance.o OMvdistance.o TWEDdistance.o checktriangleineq.o chisq.o constraint.o dist2matrix.o distancecalculator.o distancefunctions.o distanceobject.o eventdictionary.o eventseq.o ffunctions.o inertiafunctions.o init.o prefixtree.o seqedist.o tmrsequence.o traminerdebug.o treeeventmap.o treeeventnode.o wcorr.o weightedinertia.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpuC9emH/R.INSTALL826de317cb0e7/TraMineR/src'
make[1]: Entering directory '/tmp/RtmpuC9emH/R.INSTALL826de317cb0e7/TraMineR/src'
make[1]: Leaving directory '/tmp/RtmpuC9emH/R.INSTALL826de317cb0e7/TraMineR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-TraMineR/00new/TraMineR/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘TraMineR’
finding HTML links ... done
TraMineR-package html
TraMineR.check.depr.args html
TraMineRInternal html
actcal html
actcal.tse html
alphabet html
bfspell html
biofam html
cpal html
dissassoc html
disscenter html
dissdomassoc html
dissmfacw html
dissrep html
dissrf html
disstree-assign html
disstree-get-rules html
disstree html
disstree2dot html
disstreeleaf html
dissvar html
ex1 html
ex2 html
famform html
is.stslist html
mvad html
plot.seqdiff html
plot.seqrf html
plot.stslist html
plot.stslist.freq html
plot.stslist.meant html
plot.stslist.modst html
plot.stslist.rep html
plot.stslist.statd html
plot.subseqelist html
plot.subseqelistchisq html
print.stslist html
read.tda.mdist html
seqLLCP html
seqLLCS html
seqMD html
seqST html
seqalign html
seqcomp html
seqconc html
seqcost html
seqdecomp html
seqdef html
seqdiff html
seqdim html
seqdist html
seqdomassoc html
seqdss html
seqdur html
seqe html
seqeapplysub html
seqecmpgroup html
seqeconstraint html
seqecontain html
seqecreate html
seqefsub html
seqeid html
seqelength html
seqetm html
seqeweight html
seqfcheck html
seqfind html
seqformat html
seqfpos html
seqfposend html
seqgen html
seqibad html
seqici html
seqient html
seqindic html
seqintegr html
seqipos html
seqistatd html
seqivardur html
seqivolatility html
seqlegend html
seqlength-align html
seqlength html
seqlogp html
seqmaintokens html
seqmeant html
seqmodst html
seqmpos html
seqnum html
seqpcplot html
seqplot html
seqplotMD html
seqpm html
seqprecarity html
seqprecstart html
seqrecode html
seqrep html
seqsep html
seqstatd html
seqstatf html
seqstatl html
seqsubsn html
seqtab html
seqtransn html
seqtrate html
seqtree html
seqtreedisplay html
stlab html
str.eseq html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TraMineR)