* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘TcGSA’ ... ** this is package ‘TcGSA’ version ‘0.12.10’ ** package ‘TcGSA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘TcGSA’ finding HTML links ... done TcGSA-internal html TcGSA-package html TcGSA.LR html TcGSA.LR.parallel html chisqmix html clustTrend html data_simu_TcGSA html multtest.TcGSA html plot.TcGSA html plot1GS html Rd warning: plot1GS.Rd:217: missing link ‘element_text’ Rd warning: plot1GS.Rd:237: missing link ‘+.gg’ plotFit.GS html Rd warning: plotFit.GS.Rd:60: missing link ‘+.gg’ plotMultipleGS html Rd warning: plotMultipleGS.Rd:216: missing link ‘element_text’ Rd warning: plotMultipleGS.Rd:236: missing link ‘+.gg’ plotPat.1GS html Rd warning: plotPat.1GS.Rd:189: missing link ‘element_text’ Rd warning: plotPat.1GS.Rd:203: missing link ‘+.gg’ plotPat.TcGSA html plotSelect.GS html Rd warning: plotSelect.GS.Rd:198: missing link ‘element_text’ Rd warning: plotSelect.GS.Rd:211: missing link ‘+.gg’ pval_simu html signifLRT.TcGSA html summary.TcGSA html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TcGSA)