* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘SpaTopic’ ...
** this is package ‘SpaTopic’ version ‘1.2.0’
** package ‘SpaTopic’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzLRn8R/R.INSTALLf1b785abfbc9e/SpaTopic/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -Ilibsrc -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Gibbs.cpp -o Gibbs.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppProgress/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -Ilibsrc -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o SpaTopic.so Gibbs.o RcppExports.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzLRn8R/R.INSTALLf1b785abfbc9e/SpaTopic/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzLRn8R/R.INSTALLf1b785abfbc9e/SpaTopic/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzLRn8R/R.INSTALLf1b785abfbc9e/SpaTopic/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-SpaTopic/00new/SpaTopic/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘SpaTopic’
    finding HTML links ... done
    Seurat5obj_to_SpaTopic                  html  
    SpaTopic-Package                        html  
    SpaTopic-class                          html  
    SpaTopic_inference                      html  
    lung5                                   html  
    print.SpaTopic                          html  
    spatopic_message                        html  
    stratified_sampling_sf                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SpaTopic)