* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘SiMRiv’ ...
** package ‘SiMRiv’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-5) 13.2.0’
make[1]: Entering directory '/tmp/RtmpUSUPCs/R.INSTALL3ceb666858f2e9/SiMRiv/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c misc.c -o misc.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c raster-fn.c -o raster-fn.o
gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c simulate.c -o simulate.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o SiMRiv.so init.o misc.o raster-fn.o simulate.o -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpUSUPCs/R.INSTALL3ceb666858f2e9/SiMRiv/src'
make[1]: Entering directory '/tmp/RtmpUSUPCs/R.INSTALL3ceb666858f2e9/SiMRiv/src'
make[1]: Leaving directory '/tmp/RtmpUSUPCs/R.INSTALL3ceb666858f2e9/SiMRiv/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-SiMRiv/00new/SiMRiv/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘SiMRiv’
    finding HTML links ... done
    Arith-methods                           html  
    SiMRiv-package                          html  
    adjustModel                             html  
    finding level-2 HTML links ... done

    binCounts                               html  
    generationPlot                          html  
    perceptualRange                         html  
    resistanceFromShape                     html  
    river                                   html  
    sampleMovement                          html  
    simulate                                html  
    species                                 html  
    speciesModel                            html  
    state                                   html  
    transitionMatrix                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SiMRiv)