* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘SIRmcmc’ ...
** package ‘SIRmcmc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/tmp/RtmpMuDnkX/R.INSTALL18cbf1011c8ee/SIRmcmc/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c MCMC_functions.cpp -o MCMC_functions.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o SIRmcmc.so MCMC_functions.o RcppExports.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpMuDnkX/R.INSTALL18cbf1011c8ee/SIRmcmc/src'
make[1]: Entering directory '/tmp/RtmpMuDnkX/R.INSTALL18cbf1011c8ee/SIRmcmc/src'
make[1]: Leaving directory '/tmp/RtmpMuDnkX/R.INSTALL18cbf1011c8ee/SIRmcmc/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-SIRmcmc/00new/SIRmcmc/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘SIRmcmc’
    finding HTML links ... done
    MCMC_date                               html  
    community_attack_.rate                  html  
    hh.transmission                         html  
    hh.transmission.epsilon                 html  
    household_transmission                  html  
    prior                                   html  
    secondary_attack_rate                   html  
    unifprior                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (SIRmcmc)