Install log for 'Rlibeemd'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘Rlibeemd’ ...
** this is package ‘Rlibeemd’ version ‘1.4.4’
** package ‘Rlibeemd’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gsl-config... /usr/bin/gsl-config
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSt1VOb/R.INSTALL39e45a79197808/Rlibeemd/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c bemd.c -o bemd.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c bemdR.cpp -o bemdR.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ceemdan.c -o ceemdan.o
ceemdan.c: In function ‘ceemdan’:
ceemdan.c:71: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
   71 |         #pragma omp parallel
ceemdan.c:84: warning: ignoring ‘#pragma omp single’ [-Wunknown-pragmas]
   84 |                 #pragma omp single
ceemdan.c:93: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas]
   93 |                 #pragma omp for
ceemdan.c:114: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
  114 |                 #pragma omp parallel
ceemdan.c:123: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas]
  123 |                         #pragma omp for
ceemdan.c:126: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas]
  126 |                                 #pragma omp flush(sift_err)
ceemdan.c:144: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas]
  144 |                                 #pragma omp flush(sift_err)
ceemdan.c:158: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas]
  158 |                                 #pragma omp flush(sift_err)
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ceemdanR.cpp -o ceemdanR.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c eemdR.cpp -o eemdR.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c eemd_routine.c -o eemd_routine.o
eemd_routine.c: In function ‘eemd’:
eemd_routine.c:63: warning: ignoring ‘#pragma omp parallel’ [-Wunknown-pragmas]
   63 |         #pragma omp parallel
eemd_routine.c:76: warning: ignoring ‘#pragma omp single’ [-Wunknown-pragmas]
   76 |                 #pragma omp single
eemd_routine.c:91: warning: ignoring ‘#pragma omp for’ [-Wunknown-pragmas]
   91 |                 #pragma omp for
eemd_routine.c:94: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas]
   94 |                         #pragma omp flush(emd_err)
eemd_routine.c:112: warning: ignoring ‘#pragma omp flush’ [-Wunknown-pragmas]
  112 |                         #pragma omp flush(emd_err)
eemd_routine.c:113: warning: ignoring ‘#pragma omp atomic’ [-Wunknown-pragmas]
  113 |                         #pragma omp atomic
eemd_routine.c:121: warning: ignoring ‘#pragma omp single’ [-Wunknown-pragmas]
  121 |                 #pragma omp single
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c emd.c -o emd.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c emd_num_imfsR.cpp -o emd_num_imfsR.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c error.c -o error.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c extrema.c -o extrema.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c extremaR.cpp -o extremaR.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c gslErrorHandlerOff.cpp -o gslErrorHandlerOff.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c printError.cpp -o printError.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c spline.c -o spline.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c version.c -o version.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -I/usr/include  -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c workspace.c -o workspace.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o Rlibeemd.so RcppExports.o bemd.o bemdR.o ceemdan.o ceemdanR.o eemdR.o eemd_routine.o emd.o emd_num_imfsR.o error.o extrema.o extremaR.o gslErrorHandlerOff.o printError.o spline.o version.o workspace.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSt1VOb/R.INSTALL39e45a79197808/Rlibeemd/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSt1VOb/R.INSTALL39e45a79197808/Rlibeemd/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSt1VOb/R.INSTALL39e45a79197808/Rlibeemd/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-Rlibeemd/00new/Rlibeemd/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘Rlibeemd’
    finding HTML links ... done
    ECG                                     html  
    Rlibeemd                                html  
    bemd                                    html  
    ceemdan                                 html  
    eemd                                    html  
    emd                                     html  
    extrema                                 html  
    float                                   html  
    nIMFs                                   html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Rlibeemd)