* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘RcppCWB’ ... ** package ‘RcppCWB’ successfully unpacked and MD5 sums checked ** using staged installation * operating system detected for CWB configuration: Linux * Linux distribution ID: debian (supported) * architecture: x86_64 ... using config 'linux-64' * using CWB platform configuration file: linux-64 * adapt CWB configuration file to use compiler: gcc-13 * using pkg-config to check whether glib-2.0 is available ... yes * using pkg-config to get linker flags for glib-2.0: -lglib-2.0 * check whether pcre2 is available ... yes (version: 10.42) * checking whether pcre2test is available ... no * using pcre2-config to get libdirs for pcre2 (8bit): -lpcre2-8 * using pcre2-config to get cflags for pcre2: * using build directory: /tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/CQi -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/CQi -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c addons.cpp -o addons.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/CQi -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cl.cpp -o cl.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/CQi -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cqp.cpp -o cqp.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -I/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/CQi -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o cd cwb; R_PACKAGE_SOURCE=/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb PKG_CONFIG_PATH= make clean make[2]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' for i in cl cqp ; do if [ -f "$i/Makefile" ]; then cd $i; make clean; cd ..; fi; done; make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' rm -f *.o libcl.a registry.output *~ make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' rm -f cqp cqpcl cqpserver *.o ../CQi/*.o parser.output *~ ../CQi/*~ # TODO what is "parser.output" ? make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' rm -f *~ config/*/*~ CQi/*~ CQi/*.o technical/*~ TAGS rm -f -rf build make[2]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' cd cwb; R_PACKAGE_SOURCE=/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb PKG_CONFIG_PATH= make depend make[2]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' for i in cl cqp ; do cd $i; make depend.mk; cd ..; done; make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' make[3]: 'depend.mk' is up to date. make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' make[3]: 'depend.mk' is up to date. make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' make[2]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' cd cwb; R_PACKAGE_SOURCE=/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb PKG_CONFIG_PATH= make cl make[2]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' --------------------------------- BUILDING CORPUS LIBRARY (CL) cd cl; make make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' gcc-13 -c -o globals.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:53 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include globals.c gcc-13 -c -o macros.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:53 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include macros.c gcc-13 -c -o ui-helpers.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:53 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ui-helpers.c gcc-13 -c -o list.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:53 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include list.c gcc-13 -c -o lexhash.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:53 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include lexhash.c gcc-13 -c -o ngram-hash.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:54 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ngram-hash.c gcc-13 -c -o bitfields.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:54 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include bitfields.c gcc-13 -c -o storage.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:54 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include storage.c gcc-13 -c -o fileutils.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:54 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include fileutils.c gcc-13 -c -o special-chars.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:55 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include special-chars.c gcc-13 -c -o regopt.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:55 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include regopt.c gcc-13 -c -o corpus.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:56 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include corpus.c gcc-13 -c -o attributes.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:56 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include attributes.c gcc-13 -c -o makecomps.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:57 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include makecomps.c gcc-13 -c -o registry.tab.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:57 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include registry.tab.c gcc-13 -c -o lex.creg.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:57 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include lex.creg.c gcc-13 -c -o cdaccess.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:58 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include cdaccess.c gcc-13 -c -o bitio.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include bitio.c gcc-13 -c -o endian.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include endian.c gcc-13 -c -o compression.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include compression.c rm -f libcl.a ar cqs libcl.a globals.o macros.o ui-helpers.o list.o lexhash.o ngram-hash.o bitfields.o storage.o fileutils.o special-chars.o regopt.o corpus.o attributes.o makecomps.o registry.tab.o lex.creg.o cdaccess.o bitio.o endian.o compression.o gcc-13 -c -o dl_stub.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include dl_stub.c make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl' make[2]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' cd cwb; R_PACKAGE_SOURCE=/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb PKG_CONFIG_PATH= make cqp make[2]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' --------------------------------- BUILDING CQP cd cqp; make make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' gcc-13 -c -o cqp.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include cqp.c gcc-13 -c -o symtab.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:06:59 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include symtab.c gcc-13 -c -o eval.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:00 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include eval.c gcc-13 -c -o tree.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:01 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include tree.c gcc-13 -c -o options.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:02 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include options.c gcc-13 -c -o corpmanag.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:02 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include corpmanag.c gcc-13 -c -o regex2dfa.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:03 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include regex2dfa.c gcc-13 -c -o output.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:04 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include output.c gcc-13 -c -o ranges.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:04 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ranges.c gcc-13 -c -o builtins.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:05 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include builtins.c gcc-13 -c -o groups.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:05 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include groups.c gcc-13 -c -o targets.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:05 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include targets.c gcc-13 -c -o matchlist.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:06 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include matchlist.c gcc-13 -c -o concordance.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:06 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include concordance.c gcc-13 -c -o parse_actions.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:07 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include parse_actions.c gcc-13 -c -o attlist.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:09 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include attlist.c gcc-13 -c -o context_descriptor.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:09 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include context_descriptor.c gcc-13 -c -o print-modes.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:09 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include print-modes.c gcc-13 -c -o ascii-print.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:09 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ascii-print.c gcc-13 -c -o sgml-print.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:10 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include sgml-print.c gcc-13 -c -o html-print.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:10 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include html-print.c gcc-13 -c -o latex-print.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:10 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include latex-print.c gcc-13 -c -o variables.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:10 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include variables.c gcc-13 -c -o print_align.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:10 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include print_align.c gcc-13 -c -o macro.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:11 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include macro.c gcc-13 -c -o parser.tab.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:11 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include parser.tab.c gcc-13 -c -o lex.yy.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:12 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include lex.yy.c gcc-13 -c -o ../CQi/server.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:13 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ../CQi/server.c gcc-13 -c -o ../CQi/auth.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:13 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ../CQi/auth.c gcc-13 -c -o ../CQi/log.o -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:14 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include ../CQi/log.c rm -f libcqp.a ar cqs libcqp.a cqp.o symtab.o eval.o tree.o options.o corpmanag.o regex2dfa.o output.o ranges.o builtins.o groups.o targets.o matchlist.o concordance.o parse_actions.o attlist.o context_descriptor.o print-modes.o ascii-print.o sgml-print.o html-print.o latex-print.o variables.o print_align.o macro.o parser.tab.o lex.yy.o ../CQi/server.o ../CQi/auth.o ../CQi/log.o make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp' make[2]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' cd cwb; R_PACKAGE_SOURCE=/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb PKG_CONFIG_PATH= make utils make[2]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' --------------------------------- BUILDING UTILITIES cd utils; make make[3]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/utils' gcc-13 -c -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:14 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -o cwb-encode.o cwb-encode.c gcc-13 -c -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:15 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -o cwb-makeall.o cwb-makeall.c gcc-13 -c -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:15 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -o cwb-huffcode.o cwb-huffcode.c gcc-13 -c -O2 -Wall -fPIC -fPIC -m64 -DUSE_TERMCAP -DUSE_READLINE -DCOMPILE_DATE=\""Wed May 1 05:07:15 CEST 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -o cwb-compress-rdx.o cwb-compress-rdx.c --------------------------------- CREATING ARCHIVE rm -f libcwb.a ar cqs libcwb.a cwb-encode.o cwb-makeall.o cwb-huffcode.o cwb-compress-rdx.o make[3]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/utils' make[2]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb' g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o RcppCWB.so RcppExports.o addons.o cl.o cqp.o utils.o -L/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cl -L/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/cqp -L/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src/cwb/utils -lcwb -lcqp -lcl -lglib-2.0 -lpcre2-8 -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src' make[1]: Entering directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src' make[1]: Leaving directory '/tmp/RtmputIt6R/R.INSTALL3c0e8953a60963/RcppCWB/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-RcppCWB/00new/RcppCWB/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘RcppCWB’ finding HTML links ... done RcppCWB-packge html check_pkg_registry_files html checks html cl_attribute_size html cl_charset_name html cl_delete_corpus html cl_find_corpus html cl_functions html cl_lexicon_size html cl_list_corpora html cl_load_corpus html cl_rework html cl_struc_values html corpus_is_loaded html cqp_initialize html cqp_list_corpora html cqp_query html cwb_charsets html cwb_utils html cwb_version html get_cbow_matrix html get_count_vector html get_pkg_registry html get_region_matrix html ids_to_count_matrix html matrix_to_subcorpus html p_attr_default html p_attributes html region_matrix_ops html regions_to_strucs html registry_info html s_attr_regions html s_attribute_decode html s_attributes html subcorpus_get_ranges html tmp_registry html xml html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppCWB)