* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘QTLRel’ ...
** this is package ‘QTLRel’ version ‘1.15’
** package ‘QTLRel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.3.0-10) 14.3.0’
using Fortran compiler: ‘GNU Fortran (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphyEMzR/R.INSTALL3ff42b19b7192a/QTLRel/src'
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c QTLRelR.c -o QTLRelR.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c distn.c -o distn.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dqrls.f -o dqrls.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ibsFn.c -o ibsFn.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c idcoef.c -o idcoef.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c imFn.c -o imFn.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ks.c -o ks.o
ks.c:38:1: warning: ‘pkstwo’ defined but not used [-Wunused-function]
38 | pkstwo(int n, double *x, double tol)
| ^~~~~~
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c qqplot.c -o qqplot.o
gcc-14 -std=gnu23 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rgdat.c -o rgdat.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c sc10.f -o sc10.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c sc11.f -o sc11.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c sc20.f -o sc20.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c sc21.f -o sc21.o
gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o QTLRel.so QTLRelR.o distn.o dqrls.o ibsFn.o idcoef.o imFn.o init.o ks.o qqplot.o rgdat.o sc10.o sc11.o sc20.o sc21.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphyEMzR/R.INSTALL3ff42b19b7192a/QTLRel/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphyEMzR/R.INSTALL3ff42b19b7192a/QTLRel/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphyEMzR/R.INSTALL3ff42b19b7192a/QTLRel/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-QTLRel/00new/QTLRel/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘QTLRel’
finding HTML links ... done
aicVC html
blup html
cic html
eigen_sym html
estVC html
genMatrix html
genoImpute html
genoProb html
genoSim html
gls html
hapSim html
ibs html
kinship html
lodci html
mAIC html
misFct html
miscEx html
nullSim html
pedRecode html
plots html
qqplot html
qtl2rel html
qtlVar html
rel2qtl html
rem html
scanOne html
scanTwo html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (QTLRel)