* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘Publish’ ...
** this is package ‘Publish’ version ‘2023.01.17’
** package ‘Publish’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘Publish’
    finding HTML links ... done
    CiTable                                 html  
    Diabetes                                html  
    Publish-package                         html  
    SpaceT                                  html  
    Units                                   html  
    acut                                    html  
    ci.mean                                 html  
    ci.mean.default                         html  
    coxphSeries                             html  
    fixRegressionTable                      html  
    followupTable                           html  
Rd warning: followupTable.Rd:36: missing link ‘anova.coxph’
    formatCI                                html  
    glmSeries                               html  
    labelUnits                              html  
    lazyDateCoding                          html  
    lazyFactorCoding                        html  
    org                                     html  
    parseInteractionTerms                   html  
    plot.ci                                 html  
    plot.regressionTable                    html  
    plot.subgroupAnalysis                   html  
    plotConfidence                          html  
    print.ci                                html  
    print.subgroupAnalysis                  html  
    print.table2x2                          html  
    print.univariateTable                   html  
    pubformat                               html  
    publish.CauseSpecificCox                html  
    publish.MIresult                        html  
    publish                                 html  
    publish.Score                           html  
    publish.ci                              html  
    publish.coxph                           html  
    publish.glm                             html  
    publish.htest                           html  
    publish.matrix                          html  
    publish.riskRegression                  html  
    publish.summary.aov                     html  
    publish.survdiff                        html  
    regressionTable                         html  
    spaghettiogram                          html  
    specialFrame                            html  
Rd warning: specialFrame.Rd:30: missing link ‘model.design’
Rd warning: specialFrame.Rd:34: missing link ‘strata’
Rd warning: specialFrame.Rd:37: missing link ‘model.design’
Rd warning: specialFrame.Rd:39: missing link ‘model.design’
Rd warning: specialFrame.Rd:42: missing link ‘strip.terms’
Rd warning: specialFrame.Rd:45: missing link ‘strip.terms’
Rd warning: specialFrame.Rd:48: missing link ‘strip.terms’
Rd warning: specialFrame.Rd:51: missing link ‘strip.terms’
Rd warning: specialFrame.Rd:53: missing link ‘model.design’
Rd warning: specialFrame.Rd:62: missing link ‘model.design’
Rd warning: specialFrame.Rd:63: missing link ‘model.design’
    splinePlot.lrm                          html  
    stripes                                 html  
Rd warning: stripes.Rd:54: missing link ‘plot.prodlim’
    subgroupAnalysis                        html  
    summary.ci                              html  
    summary.regressionTable                 html  
    summary.subgroupAnalysis                html  
    summary.univariateTable                 html  
    sutable                                 html  
    table2x2                                html  
    trace                                   html  
    traceR                                  html  
    univariateTable                         html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Publish)