* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘ProbSVMs’ ... ** this is package ‘ProbSVMs’ version ‘0.2.0’ ** package ‘ProbSVMs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-16 (Debian 16.2.0-1) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpL5ITQK/R.INSTALL36409247d3153c/ProbSVMs/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Predict.cpp -o Predict.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TrainCanSVMs.cpp -o TrainCanSVMs.o TrainCanSVMs.cpp: In function ‘arma::ivec findWrkind(const arma::vec&, double, double, bool, arma::vec&, const arma::vec&, SVMCMatrix*, std::__cxx11::list&, std::__cxx11::list&, std::__cxx11::list&)’: TrainCanSVMs.cpp:141:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::list::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 141 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int i=0; i= ub - tol) VatUB.remove(bestb); | ~~~^~~~~ TrainCanSVMs.cpp:188:37: note: ‘ub’ was declared here 188 | double Qaa, Qbb, Qab, alphab, gb, ub; | ^~ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TrainSVMs.cpp -o TrainSVMs.o In file included from TrainSVMs.cpp:3: TrainSVMs.h: In function ‘bool TrSVMs_C(const arma::uvec&, double, const Ktype&, const arma::mat&, arma::vec&, SVMCMatrix*, arma::vec&, bool, double, int, double, arma::vec&, arma::mat&, double&, int&, int, bool, int, arma::vec) [with Ktype = Rcpp::Vector<14, Rcpp::PreserveStorage>]’: TrainSVMs.h:35:16: warning: ‘ui’ may be used uninitialized [-Wmaybe-uninitialized] 35 | Rprintf("Error: Initial alpha(%i) value (= %f) outside of its allowable range given by [0. %f]\n",i,alphai,ui); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TrainSVMs.h:29:19: note: ‘ui’ was declared here 29 | double alphai,ui; | ^~ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TuneSVMs.cpp -o TuneSVMs.o In file included from TuneSVMs.cpp:3: TrainSVMs.h: In function ‘bool TrSVMs_C(const arma::uvec&, double, const Ktype&, const arma::mat&, arma::vec&, SVMCMatrix*, arma::vec&, bool, double, int, double, arma::vec&, arma::mat&, double&, int&, int, bool, int, arma::vec) [with Ktype = arma::Mat]’: TrainSVMs.h:35:16: warning: ‘ui’ may be used uninitialized [-Wmaybe-uninitialized] 35 | Rprintf("Error: Initial alpha(%i) value (= %f) outside of its allowable range given by [0. %f]\n",i,alphai,ui); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TrainSVMs.h:29:19: note: ‘ui’ was declared here 29 | double alphai,ui; | ^~ TrainSVMs.h: In function ‘bool TrSVMs_C(const arma::uvec&, double, const Ktype&, const arma::mat&, arma::vec&, SVMCMatrix*, arma::vec&, bool, double, int, double, arma::vec&, arma::mat&, double&, int&, int, bool, int, arma::vec) [with Ktype = Rcpp::Vector<14, Rcpp::PreserveStorage>]’: TrainSVMs.h:35:16: warning: ‘ui’ may be used uninitialized [-Wmaybe-uninitialized] 35 | Rprintf("Error: Initial alpha(%i) value (= %f) outside of its allowable range given by [0. %f]\n",i,alphai,ui); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ TrainSVMs.h:29:19: note: ‘ui’ was declared here 29 | double alphai,ui; | ^~ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c consvmalphatoMat.cpp -o consvmalphatoMat.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c makeKMat.cpp -o makeKMat.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svmModels.cpp -o svmModels.o svmModels.cpp: In function ‘void WWQ_C(const arma::uvec&, double, const Rcpp::NumericVector&, const arma::vec&, arma::vec&, ARMASVMMatrix&, arma::vec&)’: svmModels.cpp:153:25: warning: unused variable ‘k’ [-Wunused-variable] 153 | int n=grouping.size(),k=w.size(); | ^ g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o ProbSVMs.so Predict.o TrainCanSVMs.o TrainSVMs.o TuneSVMs.o consvmalphatoMat.o init.o makeKMat.o svmModels.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpL5ITQK/R.INSTALL36409247d3153c/ProbSVMs/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpL5ITQK/R.INSTALL36409247d3153c/ProbSVMs/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpL5ITQK/R.INSTALL36409247d3153c/ProbSVMs/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-ProbSVMs/00new/ProbSVMs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘ProbSVMs’ finding HTML links ... done ClassProb-methods html GetrbfdotSigPar html ProbSVMs-package html SetUpOptPar html SetUpTunPar html as.ClassProb html makeKMat html predictPVM html predictSVM html trainPVM html trainSVM html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ProbSVMs)